Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr3g2569 | ATGAAAGGAACTAGATTGATATCGTTGTTCTCCAAGCAGCATCTACGTCCTTCTTCTCATCCTCAATTCCGATTCTTCAACTCTTCTTCTTCATCAGCTTCCTCAAACAAGCTCTTCGTTGGAGGATTATCATGGTCTGTAGATGAAAAATCCCTCAAAGATGCTTTCTCTTCCTTTGGAGATGTCACTGAAGTGAGGATAGTGTATGATAAAGATAGTGGTAGAGCTAGAGGCTTTGGATTTGTTATCTTTTCAAATGAAGATGCTGCAAAATCTGCTAAAGATGCAATGGATGGAAAGGCATTGTTGGGTAGACCATTGAGGATAAATTTTGCTCTCGAGAAGCCCCGTGGTATACCTGTAGTTGTTCCTCGATTTACAGATAACGGACACTTCAACAAGCACTAA | 408 | 0.4044 | MKGTRLISLFSKQHLRPSSHPQFRFFNSSSSSASSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEKPRGIPVVVPRFTDNGHFNKH* | 136 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr3g2569 | 135 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 38 | 108 | IPR000504 | GO:0003723 | |
Mtr3g2569 | 135 | SMART | rrm1_1 | 37 | 110 | IPR000504 | GO:0003723 | |
Mtr3g2569 | 135 | Gene3D | - | 11 | 118 | IPR012677 | - | |
Mtr3g2569 | 135 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL | 12 | 134 | - | - | |
Mtr3g2569 | 135 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 36 | 114 | IPR000504 | GO:0003723 | |
Mtr3g2569 | 135 | SUPERFAMILY | RNA-binding domain, RBD | 21 | 118 | IPR035979 | GO:0003676 | |
Mtr3g2569 | 135 | PANTHER | TRANSFORMER-2-RELATED | 12 | 134 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr3g2569 | Mtr-Chr3 | 39718178 | 39719423 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr3g2569 | 2 | 116 | C2H2 Transcription Factor Family | AT2G19380 | 33.043 | 3.24e-15 | 69.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr3g2569 | - | - | gmx:100810104 | 184.496 |