Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2563 ATGGAACATCAACCCAGATTCACCTCCTTCATTTCCCTCCCCTTATTCTCCATCTTTCTAGCTTCAATTCCATTCATAACAGAATCCAAATGCACAAAAGGCTGTTCACTTGCTTTAGCCAACTTTTATGTATCCCAAGGCTCCAACCTCACTTATATTTCAAGTATTATGAGATCGAACATTCAGACAAGACCAGAAGACATAGTTGAATACAGCCGCGAAATAATACCTAGTAAAGACAGTGTTCAAGCTGGTCAAAGACTCAACGTTCCATTCCCTTGTGATTGTATCGACGGCCAGTTTCTCGGTCACAAGTTTAGCTACGATGTTGAAACTGGCGACACTTATGAAACTGTTGCTACAAATAATTATGCTAACTTAACAAATGTTGAATGGTTGAGGAGGTTTAATACTTATCCACCGAATGATATTCCTGATACTGGAACGTTGAATGTTACTGTTAATTGTTCTTGTGGGGATGCTGATGTTGGGAATTATGCCTTGTTTGTTACTTATCCGCTTAGGCCCGGTGAGACTTTGGTGTCTGTGGCGAATTCAAGTAAAGTTGATTCGTCCTTGTTGCAGAGGTATAATCCTGGTGTCAATTTTAATCAAGGGAGTGGCATTGTTTTTGTTCCGGGAAAAGATCAGAATGGTAGCTTTGTGTTTTTGGGTTCCAGTTCAGGTCTTGGTGGTGGGGCTATTGGTGGAATAGCTGTTGGAATAGTGGTTGTTCTTCTGTTAGTGGCAGCTGCTATATATTTTGGATACTTCCGGAAGAAGAAGATACAAAAGGAGGAACTTTTTTCGCGAGATTCCACTGCACTCTTTTCTCAAGATGGGAAAGATGAAAATTCTCATGGTGCTGCAAACGTAACACAGAGGCCTGGTGTGATGACCGGCATAACAGTCGATAAATCAGTTGAATTCTCATATGATGAACTAGCAGCTGCCTCAGATAACTTTAGTATGGCTAATAAAATCGGTCAAGGAGGTTTTGGCTCTGTCTACTATGCAGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACGAAGGAATTTCTCGCTGAATTGAAAGTCCTGACACGTGTTCATCATCTTAACTTGGTGCGGTTGATTGGATATAGTATTGAAGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAACGGAAACTTGAGTCAGCATTTGCGTGGTTCAGGTAGAGATCCACTGCCATGGGCTACACGTGTGCAAATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATCCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGCCAGCAAATATATTGATAGACAAGAACTTCCGGGGAAAGGTTGCTGATTTTGGATTGACCAAACTGACGGAAGTTGGAAGCTCGTCGCTTCCCACCGGTCGTCTTGTTGGTACATTTGGATACATGCCCCCAGAGTATGCTCAATATGGAGACGTTTCTCCCAAAGTAGATGTTTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCGGCGAAGGAGGCAATCGTCAAGTCGAGCGAATCTGTTGCAGATTCAAAGGGACTTGTTGGTTTGTTTGAAGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTCGCAAAATAGTGGATCCAAGGCTTGGGGATAACTACCCTGCAGATTCAGTTCGCAAGATGGCTCAATTAGCCAAAGCGTGCACACAGGAAAATCCTCAACTGCGTCCGAGTATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCAACTACGGACGATTGGGACGTTGGTTCCTTTTACGAAAATCAAAACCTTGTGAATCTTATGTCAGGAAGATAG 1866 0.4239 MEHQPRFTSFISLPLFSIFLASIPFITESKCTKGCSLALANFYVSQGSNLTYISSIMRSNIQTRPEDIVEYSREIIPSKDSVQAGQRLNVPFPCDCIDGQFLGHKFSYDVETGDTYETVATNNYANLTNVEWLRRFNTYPPNDIPDTGTLNVTVNCSCGDADVGNYALFVTYPLRPGETLVSVANSSKVDSSLLQRYNPGVNFNQGSGIVFVPGKDQNGSFVFLGSSSGLGGGAIGGIAVGIVVVLLLVAAAIYFGYFRKKKIQKEELFSRDSTALFSQDGKDENSHGAANVTQRPGVMTGITVDKSVEFSYDELAAASDNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKSSESVADSKGLVGLFEGVLSQPDPTEDLRKIVDPRLGDNYPADSVRKMAQLAKACTQENPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2563 621 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Mtr3g2563 621 Gene3D Transferase(Phosphotransferase) domain 1 393 612 - -
Mtr3g2563 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 14 621 - -
Mtr3g2563 621 Pfam Protein tyrosine and serine/threonine kinase 324 592 IPR001245 GO:0004672|GO:0006468
Mtr3g2563 621 SMART serkin_6 322 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2563 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 14 621 IPR044812 GO:0019199|GO:0045087
Mtr3g2563 621 CDD STKc_IRAK 328 590 - -
Mtr3g2563 621 ProSiteProfiles Protein kinase domain profile. 322 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2563 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Mtr3g2563 621 Gene3D Phosphorylase Kinase; domain 1 297 392 - -
Mtr3g2563 621 SUPERFAMILY Protein kinase-like (PK-like) 302 593 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2563 Mtr-Chr3 39656726 39665956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2563 13 621 Receptor kinase-like Gene Family AT3G21630 61.389 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr3g2563 PK_Tyr_Ser-Thr 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2563 - K13429 gmx:100777781 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2563 3 39656726 39665956 Mtr5g2981 5 38419749 38423709 PCT