Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2551 ATGGCCATGCAACTAAGTATTGGTTCTTCTTCTTCTTCGTTTGCGAGGGTGGTGACTCCAAAAGAGTTTGATGTTTTTATCAGCTTTCGTGGTGAGGATACTCGTAGAAACTTCACAAGCCATCTTTATGAAGCTCTGAGCAAGAAAGTTATAACATTTATAGATGACAATGAGCTTGAAAAAGGAGACGAGATCTCGTCAGCACTGATCAAAGCTATTGAGAAGTCGTCTGCATCTATCGTCATCTTCTCAAAAGACTATGCTTCCTCAAAATGGTGCTTGAATGAACTCGTCAAGATTCTAGAATGCAAGAAAGATAATGGACAGATTGTGATACCTGTTTTCTATGAAATAGATCCATCACATGTGAGGAATCAGAAAGGAAGTTATATGTTAGCTTTTGAAAAACATGAACAAGATTTGAAGCAGAGCAAAGACAAATTGCAAAAATGGAAAGATGCTCTCACCGAAGCTGCCAATTTAGCTGGGTGGTACTCTCAAAATTACAAGAATGACTCCATCTTCATTAAATACATCATCGAAGACGTTTTGAAAAAATTGAATCTGAGACACCCATTTGAAGTTAATGGGCACCTTTTTGGAATTGAGGAAAAGTATGAAGAGGTTAAATCGTTACTGAAAATTGGGTCAAATGATGTTAGAGGCCTAGGATTATGGGGCATGGGCGGCATAGGAAAGACCACTCTTGCGAAACATTTATATTCCAAACTGTGTTCCCAATTTGATCATCATTGTTTACTCGAAAATGTAAGCGAAGAATCAACCAGATGTGGACTCAAAGGTGTACGTAATCAACTTTTTTCTAAATTGTTGGAGCTTCGTCCCGATGCACCTAATCTAGAAACCACAATTTCCATGAGAAGACTTGTATGTAAAAAAAGTTTAATTGTATTGGATGATGTGGCAACCTTAGAGCAAGCAGAAAATCTTAACATAGTTAATAATTGCTTAGGACCAGGTAGTAGAGTCATTGTCACAACTAGAGATAAGCAGGTATGTAGCCAATTTAATAAATGTGCAATATATGAGGTCAAGAGATTGAACAAAGATGAATCTCTCGAGGTATTCTGTTTGGAGGCTTTCAGAGAAAAATATCCTAAAATTGGGTATGGAGATCTATCAAAAAGAGCAATTGGCTATTGCGGAGGCAATCCCCTAGGTTTAAAAGTTTTAGGTACAAATTTTCGTACCAAAAGCAAAGAAGTGTGGGAAAGTGAACTGGAAAAGCTCAAAAAGATACCCAATCGAAGGATTCATGATGTGTTAAAATTAAGTTTTGATGGTTTAGATTGTACTCAGCAGGATATATTTTTAGACATAGTATGCTTCTTCTTTTTGGGAAAATACATAGACCGAGATTTCTTAACAACTCTATCGGATGCTAGCAATTTCTTTGCTGAAAGTGGGATTGAAGTCCTTTCAAATAAGGCTCTCATAGTATTTAGAATTTGTAATCTTATAGATATGCATGATTTGTTAGTAGAAATGGGACGAGAGATTGTTAAGCAACAATCTCCTAAAAACCCTGGAAGTAGAAGTCGATTGTGGGATCCCATGGAAGTTTGTGATACATTGAAATATAAAAAGGGAACCGAAGTTGTTGAAGTCATCATATTCGACATTTCAGAAATTAGAGATCTATACTTGACCTCTGATTCCTTTAAAAGCATGACCAACTTAAGATGTCTTCATATATTCAACAAAATGCAGCTGCCAGATGAAGGAAAACACTACAATGTGCACTTCCTCCAAGGTCTTGAGTGGTTATCTGATAAACTGAGACACCTTTATTGGGTTGGATTTCCACTTGAGTCCTTGCCATCGACCTTTTCTGCTGAATGGCTTGTAAGACTTGAAATGCGCGGTAGCAAGCTAAAAAAGCTTTGGGATGGAATTCAGAAGCTTGGCAATTTGAAGAGCATTGACCTTTGTTACTCTAAAGACCTTATCGAGATGCCAGATTTATCTAGGGCCCCAAAACTTAGTCTTGTAAGTCTTGATTTTTGTGAGAGCTTGAGTAAGCTCCATCCATCCATTCTCACTGCCCCCAAGCTTGAAGCTCTACTTTTAAGAGGATGCAAAAATATTGAAAGCCTGAAAACCAACATTTCTTCCAAATCTCTCCGACGACTCGATCTTACTGATTGCTCATCTCTTGTGGAATTTTCAATGATGTCAGAGAAAATGGAGGAGTTGTCCTTAATACAAACCTTTAAACTTGAATGTTGGTCATTTATGTTTTGTAAGAGCAGCGGTCAAATTCGTCCAAGTTGTCTCAGTCTAAGTAGATGTAAGAAGCTTAACATTATTGGGAGCAAGTTATCAAATGATCTTATGGACCTGGAACTTGTAGGATGCCCACAAATCAATACATCAAATTTGTCGTTAATCCTTGATGAACTGCGGTGTTTAAGAGAACTAAATTTGAGTTCGTGTTCTAACTTAGAAGCTCTCCCTGAAAACATTCAAAACAATTCAAAGTTGGCAGTCCTTAATTTAGATGAATGCAGGAAACTTAAGTCCCTACCAAAGCTTCCTGCATCCTTGACAGAGTTGAGAGCCATTAACTGCACTGATCTGGACATTGATTCCATTCAACGACCAATGCTTGAGAACATATTACACAAACTCCACACCATCGACAATGAAGGGGATAGAATTTTGGATACTAATTTTGGTTTCACTTTCCTTCCAGGAGACCATGTTCCGGACAAGTTTGGTTTTCTTACAAGAGAGTCTTCAATAGTTATTCCTCTTGATCCCAAATGTAAGTTGTCCGCTTTGATTTTTTGCATCATTCTTTCTGGGAGATATGGTGATTATTACGAATCTGTTTGCTGTGATTGTTTTCAAAACGGAAAAATAATCTTCAATTGGGATCAAGTGGTTAGTGCTGAGATGTTAACTGAAGACCATGTATTATTAAGCTCCTTCACAGAAATATGGTGTTTTGAAAGGCTGGACTGGACTATGAATGAAAGTGAAGGTGATCATTGCAGTATTTCATGTGAATTCATGTGTCGTGCTAACGAGGCAGAAGAATGGTCAACCGATGGGATAAAGGGTTGTGGGGTCCTCCCTGTATATAGCTTGGAATCTGAAAGTGTTGAATTACAACCCATTGTTCAAGTCTCTGATGGGCTACAACACCGAGAAATCGGAGCTGAAGTCGGAAATGATTGTGGATTCTTCCTTGTATGA 3222 0.3793 MAMQLSIGSSSSSFARVVTPKEFDVFISFRGEDTRRNFTSHLYEALSKKVITFIDDNELEKGDEISSALIKAIEKSSASIVIFSKDYASSKWCLNELVKILECKKDNGQIVIPVFYEIDPSHVRNQKGSYMLAFEKHEQDLKQSKDKLQKWKDALTEAANLAGWYSQNYKNDSIFIKYIIEDVLKKLNLRHPFEVNGHLFGIEEKYEEVKSLLKIGSNDVRGLGLWGMGGIGKTTLAKHLYSKLCSQFDHHCLLENVSEESTRCGLKGVRNQLFSKLLELRPDAPNLETTISMRRLVCKKSLIVLDDVATLEQAENLNIVNNCLGPGSRVIVTTRDKQVCSQFNKCAIYEVKRLNKDESLEVFCLEAFREKYPKIGYGDLSKRAIGYCGGNPLGLKVLGTNFRTKSKEVWESELEKLKKIPNRRIHDVLKLSFDGLDCTQQDIFLDIVCFFFLGKYIDRDFLTTLSDASNFFAESGIEVLSNKALIVFRICNLIDMHDLLVEMGREIVKQQSPKNPGSRSRLWDPMEVCDTLKYKKGTEVVEVIIFDISEIRDLYLTSDSFKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESLPSTFSAEWLVRLEMRGSKLKKLWDGIQKLGNLKSIDLCYSKDLIEMPDLSRAPKLSLVSLDFCESLSKLHPSILTAPKLEALLLRGCKNIESLKTNISSKSLRRLDLTDCSSLVEFSMMSEKMEELSLIQTFKLECWSFMFCKSSGQIRPSCLSLSRCKKLNIIGSKLSNDLMDLELVGCPQINTSNLSLILDELRCLRELNLSSCSNLEALPENIQNNSKLAVLNLDECRKLKSLPKLPASLTELRAINCTDLDIDSIQRPMLENILHKLHTIDNEGDRILDTNFGFTFLPGDHVPDKFGFLTRESSIVIPLDPKCKLSALIFCIILSGRYGDYYESVCCDCFQNGKIIFNWDQVVSAEMLTEDHVLLSSFTEIWCFERLDWTMNESEGDHCSISCEFMCRANEAEEWSTDGIKGCGVLPVYSLESESVELQPIVQVSDGLQHREIGAEVGNDCGFFLV* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2551 1073 Gene3D - 353 437 IPR042197 -
Mtr3g2551 1073 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1053 IPR044974 GO:0006952
Mtr3g2551 1073 SUPERFAMILY L domain-like 543 873 - -
Mtr3g2551 1073 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1053 - -
Mtr3g2551 1073 SUPERFAMILY "Winged helix" DNA-binding domain 424 533 IPR036390 -
Mtr3g2551 1073 Coils Coil 134 161 - -
Mtr3g2551 1073 Pfam NB-ARC domain 205 419 IPR002182 GO:0043531
Mtr3g2551 1073 Gene3D - 189 349 IPR027417 -
Mtr3g2551 1073 Gene3D Ribonuclease Inhibitor 536 712 IPR032675 -
Mtr3g2551 1073 Gene3D Ribonuclease Inhibitor 713 874 IPR032675 -
Mtr3g2551 1073 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Mtr3g2551 1073 Pfam Leucine Rich Repeat 622 640 IPR011713 -
Mtr3g2551 1073 Gene3D - 20 188 IPR035897 -
Mtr3g2551 1073 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 164 IPR035897 -
Mtr3g2551 1073 SMART till_3 22 161 IPR000157 GO:0007165
Mtr3g2551 1073 Pfam TIR domain 23 189 IPR000157 GO:0007165
Mtr3g2551 1073 PRINTS Disease resistance protein signature 222 237 - -
Mtr3g2551 1073 PRINTS Disease resistance protein signature 295 309 - -
Mtr3g2551 1073 PRINTS Disease resistance protein signature 388 402 - -
Mtr3g2551 1073 PRINTS Disease resistance protein signature 710 726 - -
Mtr3g2551 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 447 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2551 Mtr-Chr3 39485758 39490239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2551 14 863 WRKY Transcription Factor Family AT4G12020 31.214 2.14e-90 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2551 - - mtr:MTR_2g037140 1063.52