Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2541 ATGAAGAAGGTTTCTCTTTATGCTTGTTTACTACTCAGCGTGAGTTTTTTGGTTATTTTTCCATATAGCAAAGCTAGTCAAACTGATAAACTTGATGAGTTTATTCTTTCTAGAACCTCACAGAATCCTCCTAAGACTCTTTCTTGGGAAGAGGAAGATGCATCTAAAACAGATTCTTCTGCTCCTTATGTTACGCCTCAAGAGGGGCTAAGGCAAGCTGACAAGATTGACACATTGCCTGGTCAACCATATGGAGTGAATTTTGACCAATATTCAGGCTATGTCACTGTTAATCCTGAGGCTGGAAGAGAGCTTTTCTATTATTTTGTGGAGTCTCCATATAACTCTTCCACTAAACCTTTAGTTTTGTGGCTCAATGGAGGACCTGGCTGTTCCTCACTGGGGTATGGAGCCTTTCAGGAGCTAGGACCCTTCAGAATCAACTCTGATGGCAAAACACTATACCGTAACCAATATGCTTGGACTGAAGTTGCAAATGTACTATTCTTAGAGTCTCCAGCAGGAGTGGGATTTTCCTATTCAAACACAACTTCTGACTATGACAAGTCAGGAGATAAATCAACTGCCAAGGATTCTTACGTCTTCCTAATCAACTGGCTGGAGAGATTTCCACAGTACAAAACAAGAGCTTTTTACATAGCTGGAGAGAGTTATGCTGGTCATTATGTTCCTCAACTTGCATCGACTATTCTTCACAACAATAAACTCTATAACAACACTGTTATTAACCTCAAAGGCATTTCTATAGGGAATGCTTGGATTGATGATGCCACAAGTTTGAAGGGGTTATTTGATTACTTTTGGACTCATGCTTTGAATTCAGATCAAACTCATGAGTTGATTGAGAAGTACTGTGACTTCACTGTTGACTTCACTAGTGGAAATACTTCAGCAATATGCAACAATGTAACAGATAGGGCTTACACTGAGAAAGGAAAGATAGATTTCTATAACATCTACGCTCCATTGTGTCACGACTCTTCTTTGAAAAATGGTTCAACTGGTTATGTAAGTAATGATTTTGACCCTTGTTCTGATTACTATGGCATTGCCTATTTAAATAGACCAGAGGTTCAACAGGCTCTTCATGCAAAACCTACAAATTGGAGCTATTGCAGTGAAATTAATTCTAAATGGAAAGACAGTCCAATTACCGTCCTACCTACCATCAAGTATCTCATCGACAGTGGCATTAAATTATGGATATACAGTGGTGATACTGATGGAAGAGTTCCAGTTACATCTTCAAGATATTCAATCAACACCCTAAAGCTCCCAATCAACGATGCTTGGCATCCATGGTATTCTGGAAAAGAGATTGGAGGGTATGTGGTGGGATACAAAGGATTAACATTTGTTACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCCGAACGTGCTTTGACTTTGATCTCATCATTCCTCTATGGAAGCCTGCCTGCTTCTGTTTCACCATCAAACTAA 1494 0.3969 MKKVSLYACLLLSVSFLVIFPYSKASQTDKLDEFILSRTSQNPPKTLSWEEEDASKTDSSAPYVTPQEGLRQADKIDTLPGQPYGVNFDQYSGYVTVNPEAGRELFYYFVESPYNSSTKPLVLWLNGGPGCSSLGYGAFQELGPFRINSDGKTLYRNQYAWTEVANVLFLESPAGVGFSYSNTTSDYDKSGDKSTAKDSYVFLINWLERFPQYKTRAFYIAGESYAGHYVPQLASTILHNNKLYNNTVINLKGISIGNAWIDDATSLKGLFDYFWTHALNSDQTHELIEKYCDFTVDFTSGNTSAICNNVTDRAYTEKGKIDFYNIYAPLCHDSSLKNGSTGYVSNDFDPCSDYYGIAYLNRPEVQQALHAKPTNWSYCSEINSKWKDSPITVLPTIKYLIDSGIKLWIYSGDTDGRVPVTSSRYSINTLKLPINDAWHPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFLYGSLPASVSPSN* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2541 497 Gene3D - 393 487 - -
Mtr3g2541 497 Pfam Serine carboxypeptidase 80 485 IPR001563 GO:0004185|GO:0006508
Mtr3g2541 497 PANTHER CARBOXYPEPTIDASE 19 492 - -
Mtr3g2541 497 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Mtr3g2541 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Mtr3g2541 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Mtr3g2541 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Mtr3g2541 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Mtr3g2541 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 457 474 IPR033124 GO:0004185
Mtr3g2541 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 492 IPR001563 GO:0004185|GO:0006508
Mtr3g2541 497 SUPERFAMILY alpha/beta-Hydrolases 76 487 IPR029058 -
Mtr3g2541 497 MobiDBLite consensus disorder prediction 44 64 - -
Mtr3g2541 497 Gene3D alpha/beta hydrolase 71 333 IPR029058 -
Mtr3g2541 497 Gene3D - 351 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2541 Mtr-Chr3 39390236 39393801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2541 348 488 Calmodulin-binding Proteins AT2G22960 29.252 2.55e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2541 K16297 - gmx:100779407 791.571