Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2528 ATGATCAACGTTGCTGCTGCTTCTTCTTCTTCTTCTCTGATGCCGTCTCCTAAAAAATATGATGTTTTTCTTAGCTTTCGAGGTGAAGATACTCGCGACAACATCACAAGCCATCTTTGTGAAGCATTGAACCAAAAGAAAGTTGAAACATATATAGACTACAGGCTTGAAAAAGGAGAGGGGATAGGGCCATCACTCATCACAGCCATTGAAGAGTCACATGTTTCTGTTGTCATATTTTCAGAAAACTATGCTTCATCCAAGTGGTGTTTGGATGAAATTGTGAAGATCATGGAATGTAAGAAAGATCGGGGACAAATTGTGATACCTGTGTTCTATAAAATAGATCCATCACATGTGAGAAATCAGAGAGGAACGTACAAGAAATGGTTTGCAAAACATGAGTCAGATCTCATGAGCAACAGTAGTCAAAATAGGGTGTTCAATTGGAGAAGTGCTGTCACAGAAGCTGCCAATTTGGCTGGATGGGACTTTCAAACTTATAGGTCTGAATCTCAATTCATCAAAGACATTGTTAAAGACATTTTGCAACGACTGAATTTTGTTCAACCAATTGAGTTGAAGGGAGTGGTTGGGATTGAGGAAAATTATGAAGGTGTTAAATCATTATTAGAAATGGGATCAAAAGAAGTTAAAAGGATTGGGATATGGGGCATGGGTGGCATAGGGAAGACCACCCTAGCAATTGCTTTACATGCCAAACTATTTTCTCAATTTGAAGGTCATTGCTTTTTGGCCAATGTAAGGGAACAAACAGAAAAGAATAGTATAGATTTCTTGCGCAACAAGCTTTTTTCAGAGCTGTTAGAGGAAGAGAATCTCCATGTTGATGTACCCAAAGTTGAATACCGTCATGTTAACAATAGGCTTAGACGTAAAAAAGTTCTTATTGTTTTGGATAATGTGGCTAACTCAGAGCAGTTAGATGATCTAATCAGTGACAGTGATTATGAATGTTTGGGACCAGGAAGTAGAGTGATTGTAACAACCAGAGATAAGCATATAACTAGCAATGTTGATGAAATATACGAGGTCAAGGAATTGAATAAGCACAACTCTCTTCAGCTTTTCTGTTTGACTGTATTCAAAGAAAAGCATCCTAAAAGTGGATATGAAGAGCTCTCAGAAAGTGTTATTGCCTATTGCAAAGGCAATCCTTTGGCTTTAAAAGTTTTGGGTGCACGTCTTCGTTCAAGAAGTAAAGAAGCATGGAAAAATGAATTGGAAAAACTCCAGAAGATTCCAGAAATGAAAATTCAGAATGTGTTAAAATTGAGTTATGATGACTTAGATAGTGATGAACAAAACATATTTCTAGACATAGCATGCTTCGTCAAAGGAGAATCTAAAGATCGCGTGACAAGCTTTTTGAAAGCTTGTAATTTCTTCCCGGGCATTAGGATAGATGACCTTGTCGAAAAGTCTCTTGTAACCATTTCAAATAAGGGTACGATACAAATGCACGACTTAATACAAGAAATGGGTTGGAATATTGTTCATCAAGAATCTCCCAAAGATCCTGGAAGCAGAAGTCGATTGTGGGATCCCAAGGAAGTGTACGATGGAACTGAATCTGTGGAAGGCATAACTTTAGATGTGTCTAAAATTGAGGATCTACATTTGAGTTCTAATTCTTTTTCAAAAATGTCAGAGATGAGATTTCTTAAATTCTATTATGGGAAGTACAACGGGACAAGTAATATATATCTTCCTGAAGGTCTGGACTCATTGTCTGACAAATTGAGGTACCTTGAGTGGCATAGATACTGTCTGAAGTCTTTGCCATTAAAATTCGATGCTAACTTGCTTGTAGAGCTTTGCATGCCTTATAGCAACCTTCAAAAGCTTTGGGACGGAGTTCAGAATCTTGTGAATTTGAAGGAAATTGACCTTAGATTCTGCAAAGAGCTGGTTGAGGTACCAGATTTGTCTATGGCTAAGAATTTGGAAGGATTATCACTTTCCCAATGTAAAAATCTGCGTGAAATCCATCCTTCTATTTTATCACTCGACAAGCTTCAAGATCTCGAATTAGAAGGTTGTAAAAAGATTACAAGTCTTCAGACTGACAATCATTTAGAGTCTCTCCAAAGCATCACACTCAGCAACTGCTCATCTCTCAGAGAATTTTCAGTCACCTCTAACAATCTCAAGAATCTTTGGCTCGATGGTACATCTATCGAAGAATTGCCCTCGTCAATTTGGTGTTGCCAGAAACTGAAGATGATTGATCTACACAATTGTGACAATCTTCTAGGTTTTGGGGACAATATTGAAAACTATATAGAAATTGGATCTCTTAATACTCTGGTCCTTTCTGGGTGCAAACAACTCAATGCATCAAATCTCTATTTCAACATCAAAGCATGGCAATCAACTTTAACCTCGCTGAATTTGGAAAACTGTTGCAACTTAAAGGCACTACCTGACAACATTGGTTTATTATCATCGTTGCAACGCTTAAGGCTAAGTGGAAGCAATGTTGAGAGTTTGACACCAAACATAAAAAATCTCAACAACCTCAAAGAACTAAGGTTAGACTACTGCAAGAAACTCGTGTCCGTATCTGTGTCTGACTTTCCACCGTCACTGCGATTGTTTAGTGCTATTAACTGCATTTCTCTTGTCACTGACCTTACTACATTGGACATACCCTTTGAACATAGATCGAAACCTCAACCATATCCTCAATCTGTGTTCTTCCCTGGAACTCATGTTCCTAAAAGATTTAGTTTTTGTTCTGAAGAAAATCATCCTCAGTGTTCAACTTCTGAAGTAACAGTTGGGCATCTTCCTGAATCTGGTTTATACGGTTTTGTGTTGTGCCTGGTCCTTTCCAAGTCAAATGACAAGTACGGAGCTATTCAGTGCAACATTTACCAAAATTCAAAATACATAGGTGGAAAAGCTACCTCTTTGGGTAATTTACATTTGGTTAGGGATCACGTGTTTCTTTGGTATCTTGATATTAGAGGTGGTGCTACACACATTTCTTTGCATGGCCAAATACAAAAACGTGGAGGGTGGGATAATCCTTACAACATGTCCTTTCAATTTTCACTTGAAAATGAGGAGGGAGAATGGTCAACAGAGAGGATAAAAGGTTGTGGGGTGTTACCACTTTATCACTTAGAAGAATCCAACAACTATGATGAGATGAATGAGTTGCAAGTCACAGAAATTGGATCTTATCATGTAAATGAAGAGGACCAGACTAAGAAATTACATCAAGTTACGGTTGCGACTTGCATTAAAGACGAAAAACTAGACTCCAATAAAACGTCTTCGTCTCACATCTTTGTAGTTCCAACAGCAACAAATATAAATGGTTGCACGAGAAAACCACAATGTTTGGAGGAAGAGGAATGCTATGCAAGTTCTGTCAAAAAATTAAATGCTTGCTATACAAATACAAGTTCAGCACCTACGAATCAAGTAAGCCACTCATCTGCATAA 3477 0.3788 MINVAAASSSSSLMPSPKKYDVFLSFRGEDTRDNITSHLCEALNQKKVETYIDYRLEKGEGIGPSLITAIEESHVSVVIFSENYASSKWCLDEIVKIMECKKDRGQIVIPVFYKIDPSHVRNQRGTYKKWFAKHESDLMSNSSQNRVFNWRSAVTEAANLAGWDFQTYRSESQFIKDIVKDILQRLNFVQPIELKGVVGIEENYEGVKSLLEMGSKEVKRIGIWGMGGIGKTTLAIALHAKLFSQFEGHCFLANVREQTEKNSIDFLRNKLFSELLEEENLHVDVPKVEYRHVNNRLRRKKVLIVLDNVANSEQLDDLISDSDYECLGPGSRVIVTTRDKHITSNVDEIYEVKELNKHNSLQLFCLTVFKEKHPKSGYEELSESVIAYCKGNPLALKVLGARLRSRSKEAWKNELEKLQKIPEMKIQNVLKLSYDDLDSDEQNIFLDIACFVKGESKDRVTSFLKACNFFPGIRIDDLVEKSLVTISNKGTIQMHDLIQEMGWNIVHQESPKDPGSRSRLWDPKEVYDGTESVEGITLDVSKIEDLHLSSNSFSKMSEMRFLKFYYGKYNGTSNIYLPEGLDSLSDKLRYLEWHRYCLKSLPLKFDANLLVELCMPYSNLQKLWDGVQNLVNLKEIDLRFCKELVEVPDLSMAKNLEGLSLSQCKNLREIHPSILSLDKLQDLELEGCKKITSLQTDNHLESLQSITLSNCSSLREFSVTSNNLKNLWLDGTSIEELPSSIWCCQKLKMIDLHNCDNLLGFGDNIENYIEIGSLNTLVLSGCKQLNASNLYFNIKAWQSTLTSLNLENCCNLKALPDNIGLLSSLQRLRLSGSNVESLTPNIKNLNNLKELRLDYCKKLVSVSVSDFPPSLRLFSAINCISLVTDLTTLDIPFEHRSKPQPYPQSVFFPGTHVPKRFSFCSEENHPQCSTSEVTVGHLPESGLYGFVLCLVLSKSNDKYGAIQCNIYQNSKYIGGKATSLGNLHLVRDHVFLWYLDIRGGATHISLHGQIQKRGGWDNPYNMSFQFSLENEEGEWSTERIKGCGVLPLYHLEESNNYDEMNELQVTEIGSYHVNEEDQTKKLHQVTVATCIKDEKLDSNKTSSSHIFVVPTATNINGCTRKPQCLEEEECYASSVKKLNACYTNTSSAPTNQVSHSSA* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2528 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 163 IPR035897 -
Mtr3g2528 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1081 IPR044974 GO:0006952
Mtr3g2528 1158 Pfam TIR domain 19 190 IPR000157 GO:0007165
Mtr3g2528 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Mtr3g2528 1158 SUPERFAMILY L domain-like 493 885 - -
Mtr3g2528 1158 Gene3D - 15 186 IPR035897 -
Mtr3g2528 1158 Gene3D - 187 353 IPR027417 -
Mtr3g2528 1158 Pfam Leucine Rich Repeat 610 628 IPR011713 -
Mtr3g2528 1158 Gene3D - 354 438 IPR042197 -
Mtr3g2528 1158 SMART till_3 19 160 IPR000157 GO:0007165
Mtr3g2528 1158 PRINTS Disease resistance protein signature 220 235 - -
Mtr3g2528 1158 PRINTS Disease resistance protein signature 296 310 - -
Mtr3g2528 1158 PRINTS Disease resistance protein signature 389 403 - -
Mtr3g2528 1158 PRINTS Disease resistance protein signature 698 714 - -
Mtr3g2528 1158 ProSiteProfiles TIR domain profile. 18 186 IPR000157 GO:0007165
Mtr3g2528 1158 Gene3D Ribonuclease Inhibitor 723 896 IPR032675 -
Mtr3g2528 1158 Gene3D Ribonuclease Inhibitor 529 722 IPR032675 -
Mtr3g2528 1158 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1081 - -
Mtr3g2528 1158 Pfam NB-ARC domain 208 433 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2528 Mtr-Chr3 39264385 39271288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2528 16 851 WRKY Transcription Factor Family AT4G12020 30.832 5.83e-107 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2528 - - gsj:114410062 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2528 3 39264385 39271288 Mtr3g2528 3 39264385 39271288 ECH