Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2490 ATGGCAATAGCAGTAGCAAGTAGACAATTATTCATAGATGGAGAGTGGAAAGCTCCTATACTCAACAAAAGGATTCCAATAATCAATCCCTCCAATGAAAACATCATAGGGGATATACCTGCTGCTACTAAGGAAGATGTTGACCTTGCTGTGGATGCTGCTAAAAGAGCCATTTCCAGAAACAAAGGTAGAGATTGGTGTACTGCTTCTGGTTCTGTTCGTGCTGGCTATCTTCGAGCAATTGCTGCAAAGGTAACTGAGAAAAAGAATGAACTAGGCAAACTGGAATCAATTGATTGTGGAAAACCATTGGATGAAGCACTAGGGGACATGGGCGGTGTTATTGGTTGTTTTGAGTACTATGCTGGACTTGCTGAAGGATTGGATACAAAGCAAAAAGCTCCTATATCTCTTCCTATGAATACCTTCAAAAGCTATGTTCTCAAGGAGCCTATTGGTGTTGTTGCATTAATTACTCCATGGAACTATCCTCTCTCAATGGCGGCAAGGAAAATTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATCTTGAAGCCGTCTGAATTGGCATCTGTGACTTGTTTGGAGTTAGGTGAAATATGCAGAGAAGTTGGCCTTCCTCCCGGTGTCTTAAATATTGTCACTGGATTAGGCCATGAAGCTGGCGCTTCTTTGGCATCTCATCCTGATGTAGATATGATTTCCTTTACCGGTAGCTCTGCAACTGGGAGCAAGATTATGACAGCTGCAGCACAACTAATCAAGCCTGTTTTTCTAGAGCTCGGTGGAAAGAGCCCAATACTTGTTTTTGAGGATGTTGACCTTGATAAGGTTGCTGAATGGACCATCTATGGCTGCTTCTATACAAATGGTCAGATATGCAGTGCAACATCTCGCCTTATTGTGCATGAAAGTATAGCTGTAGAATTTGTGAATAGACTTGTGAAATGGGCCAAAAACATCAAAATTTCAGACCCCTTGGAAGAAGGTTGCAGGCTAGGCCCTATTGTCAGTGAAGCACAGTATAAGAAAGTATTGAATTTTATCTCAACGGCTAAGAGTGAGGGTGCAACAATTTTAACTGGTGGGCGTCGACCAGAGAATTTAAAGAAGGGATACTTTGTTGAACCAACCATCATAACAGATGTGACTACTTCAATGCAAATTTGGAGAGAAGAGGTTTTTGGACCTGTACTCTCTGTGAAAACATTTAGCACCGAGGAAGAAGCTATTGACCTAGCCAATGACACCCACTATGGCTTGGGGTCTGCTGTGATGTCAAATGATTTAGAAAGATGCGAGCGCTTATCTAAGGTTCTTAAATCTGGAATTGTATGGATCAATTGTGCTCAAACAGGTTTCGTTCGAGCTCCATGGGGAGGCATTAAACGTAGTGGTTTTGGTCGAGAATTAGGAGAATGGGGACTTGATAATTACTTGAGTGTGAAGCAAGTTACTAGGTACATATCTGATGAGCAGTGGGGCTGGTATCAATCCCCTTCAAAGATGTCATAG 1515 0.4251 MAIAVASRQLFIDGEWKAPILNKRIPIINPSNENIIGDIPAATKEDVDLAVDAAKRAISRNKGRDWCTASGSVRAGYLRAIAAKVTEKKNELGKLESIDCGKPLDEALGDMGGVIGCFEYYAGLAEGLDTKQKAPISLPMNTFKSYVLKEPIGVVALITPWNYPLSMAARKIAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNIVTGLGHEAGASLASHPDVDMISFTGSSATGSKIMTAAAQLIKPVFLELGGKSPILVFEDVDLDKVAEWTIYGCFYTNGQICSATSRLIVHESIAVEFVNRLVKWAKNIKISDPLEEGCRLGPIVSEAQYKKVLNFISTAKSEGATILTGGRRPENLKKGYFVEPTIITDVTTSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLERCERLSKVLKSGIVWINCAQTGFVRAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISDEQWGWYQSPSKMS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2490 504 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 503 - -
Mtr3g2490 504 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Mtr3g2490 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 453 IPR016163 GO:0016620
Mtr3g2490 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Mtr3g2490 504 SUPERFAMILY ALDH-like 7 488 IPR016161 GO:0016491
Mtr3g2490 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Mtr3g2490 504 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 503 - -
Mtr3g2490 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 5 503 IPR016162 GO:0016491
Mtr3g2490 504 CDD ALDH_F10_BADH 27 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2490 Mtr-Chr3 38851377 38855733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2490 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 74.850 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2490 K00130 - gmx:100170755 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2490 3 38851377 38855733 Mtr3g2490 3 38851377 38855733 ECH