Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2473 ATGAATGATGGGTTTGTGAGAGCTGATCAAATTGATCTAAAAACCATTGATGAACAACTTGAGAAACACTTCAACAAGGTAAATGATGATTCTTCTCATGATCACTCAAACTCTATTGCTACTACTGGTGGTAATAACATGGAGCAAAGAGAAGAGTGGGAAATTGATCCTTCTAACCTCATCATCAAGAGTGTCTTAGCTCGTGGCACTTTCGGTACTGTTCACCGTGGTTTCTATGATGGCCAAGATGTTGCTGTTAAAATGCTGGATTGGGGCGAAGAAGGTTACCGAACAGAAGCCGAAATTGCTGGACTCAGGTCTGCATTCACGCAAGAAGTCATTGTTTGGCATAAACTTAATCATCCTAATGTAACTAAGTTTATAGGGGCAACAATGGGGTCATCTGAATTACAGATACAAACTGACAGTGGTCTAATTAGCATGCCAAACAATATCTGCTGTGTGGTTGTTGAGTATCTTCCTGGAGGTGCATTGAAATCATTCTTAATCAAAAATAGGAGGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATATGGCAAGAGGTCTGAACTATCTTCACTCTCAGAAGATTGTCCACAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGTCTCGCACCGTTAAAATTGCTGATTTTGGCGTTGCACGTATTGAAGCGTCGAATCCAAATGACATGACCGGGGAGACTGGTACACTTGGTTACATGGCTCCTGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTATATAGTTTTGGCATATGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCTGAGATTACTTCAGCCGTTGTTCGCCAGAATGTAAGACCAGAAATACCAAGATGTTGTCCAAGTTCTGTGGCAAATGTAATGAAGAAATGCTGGGATGCGAATCCTGATAAGAGACCTGAAATGGATGAGGTAGTTGCCATGCTGGAGGCTATTGACACATCCAAAGGTGGAGGTATGATCCCTTTTGATCAGCAGCAAGGTTGTCTCTGCTTCGGTAAGCGCCGAGGGCCTTGA 1092 0.4203 MNDGFVRADQIDLKTIDEQLEKHFNKVNDDSSHDHSNSIATTGGNNMEQREEWEIDPSNLIIKSVLARGTFGTVHRGFYDGQDVAVKMLDWGEEGYRTEAEIAGLRSAFTQEVIVWHKLNHPNVTKFIGATMGSSELQIQTDSGLISMPNNICCVVVEYLPGGALKSFLIKNRRRKLAFKVVIQLALDMARGLNYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARIEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNVRPEIPRCCPSSVANVMKKCWDANPDKRPEMDEVVAMLEAIDTSKGGGMIPFDQQQGCLCFGKRRGP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2473 363 Gene3D Transferase(Phosphotransferase) domain 1 160 352 - -
Mtr3g2473 363 CDD STKc_MAP3K-like 66 334 - -
Mtr3g2473 363 ProSiteProfiles Protein kinase domain profile. 60 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2473 363 Pfam Protein tyrosine and serine/threonine kinase 62 334 IPR001245 GO:0004672|GO:0006468
Mtr3g2473 363 Gene3D Phosphorylase Kinase; domain 1 48 143 - -
Mtr3g2473 363 MobiDBLite consensus disorder prediction 27 46 - -
Mtr3g2473 363 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
Mtr3g2473 363 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Mtr3g2473 363 PRINTS Tyrosine kinase catalytic domain signature 261 283 IPR001245 GO:0004672|GO:0006468
Mtr3g2473 363 PRINTS Tyrosine kinase catalytic domain signature 305 327 IPR001245 GO:0004672|GO:0006468
Mtr3g2473 363 SMART serkin_6 60 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2473 363 SUPERFAMILY Protein kinase-like (PK-like) 39 334 IPR011009 -
Mtr3g2473 363 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 357 - -
Mtr3g2473 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Mtr3g2473 363 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 357 - -
Mtr3g2473 363 PIRSF ILK 7 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2473 Mtr-Chr3 38679409 38682664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2473 3 363 MAP Kinase Kinase Kinase AT3G22750 65.193 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr3g2473 PK_Tyr_Ser-Thr 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2473 - - gmx:100791455 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3822 4 51943924 51949474 Mtr3g2473 3 38679409 38682664 ECH
Mtr3g2473 3 38679409 38682664 Mtr3g2473 3 38679409 38682664 ECH