Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2468 ATGAAGAATTTGAACTGGTATAAACAAATTTCTAACAGTGGAAAGTCTGGGAGGAGACTTTCACTTGGTGAGTACAAAAGAGCAGTGTCTTGGTCAAAGTATTTGGTATCTCCTGGTGCTGCAATCAAAGGAGAAGGTGAAGAAGAATGGAGTGCAGATATGTCTCAGTTGCTCATTGGATCTAAATTTGCTTCTGGTAGACACAGTAGAATCTATAGAGGTGTTTACAAGCAAAAGGATGTTGCAATTAAGCTTGTGAGTCAGCCTGAAGAAGATGAAGATTTGGCTTCTTTTCTTGAGAAGCAATTTACTTCTGAAGTTGCTTTGCTTCTGAGGTTGCGTCATCCAAATATTCTTACTTTCATTGCTGCTTGCAAGAAACCACCAGTGTTCTGTATAATTACTGAGTATTTGGCTGGTGGTTCATTGAGGAAATACCTACATCAACAAGAACCACATTCAGTTCCACATGAACTTGTTCTGAAATTAGCACTAGACATTGCAAGGGGAATGAAATATCTTCATTCTCAAGGGATACTTCATAGGGATCTCAAATCAGAGAATCTCCTTTTAGATGAAGATATGTGTGTAAAAGTAGCAGATTTTGGTATCTCATGCTTGGAATCTCAATGTGGCAGCGCAAAAGGATTTACCGGAACATACCGTTGGATGGCTCCTGAAATGATCAGAGAAAAACATCATACTAAAAAAGTGGATGTGTATAGTTTCGGTATCGTTCTTTGGGAGCTTTTAACCGCATTGATTCCATTTGACAACATGACACCAGAGCAGGCTGCATTTGCAGTTTCCTACAAGAATGCAAGACCACCACTGCCATCTGAATGTCCTTGGGCGTTTAGTAATCTGATCAATAGATGTTGGTCAAGCAATCCAAATAAAAGGCCACATTTTGTTGAGATTGTCTCAATTTTGGAGTGCTTTACTGAATCACTTGAACTTGATCCAGATTTTTTCACAACTTACAAACCAAGACCTATTAATACAATTCTTGGATGTTTACCTAAATGCAAGGCTCGCCAAAAATCTGATACTTGCAAAGCAAAGCAATAG 1071 0.3875 MKNLNWYKQISNSGKSGRRLSLGEYKRAVSWSKYLVSPGAAIKGEGEEEWSADMSQLLIGSKFASGRHSRIYRGVYKQKDVAIKLVSQPEEDEDLASFLEKQFTSEVALLLRLRHPNILTFIAACKKPPVFCIITEYLAGGSLRKYLHQQEPHSVPHELVLKLALDIARGMKYLHSQGILHRDLKSENLLLDEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIREKHHTKKVDVYSFGIVLWELLTALIPFDNMTPEQAAFAVSYKNARPPLPSECPWAFSNLINRCWSSNPNKRPHFVEIVSILECFTESLELDPDFFTTYKPRPINTILGCLPKCKARQKSDTCKAKQ* 357
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2468 356 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2468 356 Pfam Protein tyrosine and serine/threonine kinase 59 311 IPR001245 GO:0004672|GO:0006468
Mtr3g2468 356 CDD STKc_MAP3K-like 64 311 - -
Mtr3g2468 356 ProSiteProfiles Protein kinase domain profile. 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2468 356 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 333 - -
Mtr3g2468 356 Gene3D Transferase(Phosphotransferase) domain 1 140 329 - -
Mtr3g2468 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Mtr3g2468 356 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Mtr3g2468 356 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Mtr3g2468 356 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Mtr3g2468 356 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Mtr3g2468 356 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Mtr3g2468 356 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Mtr3g2468 356 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Mtr3g2468 356 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr3g2468 Mtr-Chr3 38620001 38623899 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2468 30 340 MAP Kinase Kinase Kinase AT1G62400 62.187 2.36e-138 397
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr3g2468 PK_Tyr_Ser-Thr 9.9e-65 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2468 3 38620001 38623899 Mtr3g2468 3 38620001 38623899 ECH
Mtr4g3817 4 51903816 51906484 Mtr3g2468 3 38620001 38623899 PCT