Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2453 ATGCAGTCCACAGCCTTCACTCTCTCCCCTACCCTCCCTCTCCACACCAACCCCAACCGTTTCAGACGATCCCTTAACCTCCGTCTCTCCGCCGCCAAATCTAACAACAACGACGGCGGCGTAAATCACAATGGCCTCTCTTCCTCTTCTTCTTCTTCTTCATTCACTCGTCAATCATGGTCCATGTCTCCTTCCTCCTCCTCTTTCAAATTCAGACCTCTTCCTCTCGTTCCTACTTCCGATCTTTCTCCTCCTCAAGCCACTTCCGTCCCCGAAAGCGCCGGTGACTCCTCCGCCGAGTCTAGTTCGTTGCTCAAAACTCTTCAGCTTGGATCCTTGTTCGGTTTATGGTACCTCTTTAACATCTACTTCAATATTTACAACAAACAGGTTTTGAAGGCGTGTCATTTCCCTGTAACCGTGACTGTAGTTCAATTTGCTGTTGGAACTGTTCTTGTAACCTTTATGTGGGCTCTAAATCTCTACAAAAGACCTAAAATCACTGGTGCCATGCTTGCAGCAATATTTCCACTCGCTATCGTGCATACTTTGGGGAATCTTTTCACCAATATGAGTCTTGGAAAGGTGGCTGTGTCATTTACTCACACAATTAAAGCTATGGAGCCTTTCTTTTCTGTCATCCTTTCTGCCATGTTCCTTGGAGAGAGGCCTACACCCTGGGTGATTGGTTCACTCGTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTATTACTGAAGCCTCTTTCAATTGGGCTGGATTTGCAAGTGCAATGGCTTCCAATGTGACAAATCAATCACGTAATGTTCTTAGCAAAAAGGTCATGGTTAAGCAAGAGGAATCATTGGACAACATAACTCTCTTCTCTATAATTACAATAATGTCCTTCTTCTTGTTAGCTCCCGCGGCTATCTTTATGGAGGGTGTTAAATTTACCCCTGCTTACCTGCAATCTGCTGGGTTGGATGTTAGACAAGTGTACACCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCGTATCAGCAAGTTTCTTACATGATATTGCAGAGGGTATCCCCTGTTACCCATTCTGTCGGCAATTGTGTGAAGCGTGTTGTGGTCATTGTGAGCTCTGTTATCATCTTCAAAACACCTGTCTCTCCTGTGAATGCTTTTGGTACCGCTATAGCTCTTGCTGGTGTTTTCTTCTATTCAAGGGTGAAGCGAATTAAGTCAAAGCCAAAGACAGCTTAA 1233 0.4526 MQSTAFTLSPTLPLHTNPNRFRRSLNLRLSAAKSNNNDGGVNHNGLSSSSSSSSFTRQSWSMSPSSSSFKFRPLPLVPTSDLSPPQATSVPESAGDSSAESSSLLKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVTFMWALNLYKRPKITGAMLAAIFPLAIVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTPWVIGSLVPIVGGVALASITEASFNWAGFASAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFLLAPAAIFMEGVKFTPAYLQSAGLDVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTPVSPVNAFGTAIALAGVFFYSRVKRIKSKPKTA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2453 410 MobiDBLite consensus disorder prediction 32 54 - -
Mtr3g2453 410 Pfam Triose-phosphate Transporter family 108 398 IPR004853 -
Mtr3g2453 410 PANTHER SOLUTE CARRIER FAMILY 35 78 383 - -
Mtr3g2453 410 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 108 408 IPR004696 GO:0016021|GO:0022857|GO:0055085
Mtr3g2453 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 401 - -
Mtr3g2453 410 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 78 383 - -
Mtr3g2453 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2453 Mtr-Chr3 38399162 38404031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2453 1 410 Antiporters AT5G33320 69.617 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2453 K15283 - gmx:100804563 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3807 4 51827982 51831358 Mtr3g2453 3 38399162 38404031 ECH
Mtr3g2453 3 38399162 38404031 Mtr3g2453 3 38399162 38404031 ECH
Mtr4g3807 4 51827982 51831358 Mtr3g2453 3 38399162 38404031 PCT