Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2426 ATGGAATCTAAACCCTCAAACACTATTAAGATTCTCTATAGCTACGGTGGCAAGATCCGCCTTCGCTCCACCGACGGTGAACTCCGTTACGTCGGCGGTCACACCAGAGTCCTCGCCGTCGATCGTTCCATTTCATTCTCAGAATTGATGGTGAAGCTTGAAGAATTGTGCGGTTCATCTGTGACTTTACGGTGTCAATTACCAAACGGAGATTTAGAAACGTTGATTTCCATCACCAACGATGAAGATTTAACCAACATAATCGACGAATACGAACGTGCCTCGTTGAAACTAACTCATCCGTTGAAGATCAAAGCAATTCTTTCGCAGCCGAAATCGAGTTTGAAAGTTTCACCTGATCTATCATCTTCATCGTCAAATGCCAGTTTGTCTCCGGCCAGATCACCTCATACCTCCGCTGAATCGCTACCGTATGCGGTGGCGTATCGGATCGGACGTCACAGCCGCTCGCCGAGAGCTCCGGTAGGGTATTCGATCGGCGGCGTTCGGAATGGATCTGCGAAAGCTTGTTGCTATATGGGCCAGTTACAGGGAAGCCCGAGAAGCCCAAGGCCTGTGTATTATGGGCCTCGTTTCAATAATTACTGCCATTAA 615 0.4829 MESKPSNTIKILYSYGGKIRLRSTDGELRYVGGHTRVLAVDRSISFSELMVKLEELCGSSVTLRCQLPNGDLETLISITNDEDLTNIIDEYERASLKLTHPLKIKAILSQPKSSLKVSPDLSSSSSNASLSPARSPHTSAESLPYAVAYRIGRHSRSPRAPVGYSIGGVRNGSAKACCYMGQLQGSPRSPRPVYYGPRFNNYCH* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2426 204 Gene3D - 29 110 - -
Mtr3g2426 204 SUPERFAMILY CAD & PB1 domains 25 113 - -
Mtr3g2426 204 PANTHER PB1 DOMAIN PROTEIN 1 204 - -
Mtr3g2426 204 MobiDBLite consensus disorder prediction 115 138 - -
Mtr3g2426 204 PANTHER OS05G0427100 PROTEIN-RELATED 1 204 - -
Mtr3g2426 204 Pfam PB1 domain 26 98 IPR000270 GO:0005515
Mtr3g2426 204 CDD PB1_UP2 14 97 - -
Mtr3g2426 204 SMART PB1_new 23 102 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2426 Mtr-Chr3 38078627 38080352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2426 9 93 MAP Kinase Kinase Kinase AT5G57610 45.882 6.34e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2426 - - vra:106761207 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2426 3 38078627 38080352 Mtr3g2426 3 38078627 38080352 ECH
Mtr4g3771 4 51483018 51484529 Mtr3g2426 3 38078627 38080352 PCT