Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2409 ATGTTGGAAGGAAGAATGTTTCAAAATCTACCATATTCATTTCTAAAAAAAGTACCACACGATCTAAATGCCACCCTTTTCACGTTTCTTTCGTTCTTCATCAGCATGTTGCTGGTGTTCAAGTTCAAAGTTAGAAGAAACAAATTAAATCTACCTCCATCCCCACCTAGATTGCCAATAATTGGCAACTACCTTCAACTAGGAACACTCCCTCATCGATCTTTTCAATCCCTCTCACAAAAGTATGGTCCTCTAATCATGTTGCACCTTGGTCAGCTTCCTGTGTTGGTGGTTTCCTCAGTACATATGGCTAAGGAAGTTATGCAAACACATGACACTGTTTTTGCGAGCCGACCATGCATGACATCAACAAAAAACTTACTCTATGGATGTAAGGACATTGCGTTTGCATCTTATGGTGATACATGGAGACAGAAGAGGAAACTGTGTGTGATTGAATTGTTGAGTCAGAAAAGGGTGCAATCAATACAGTTTATTAGAGAAGAGGAAGCTGCATCATTGGTTGATAAGATACGTAAAGCTATGAGTTTGAGTAATGGTTGTTACGGTGTGAACCTTGGCGAGATGTTGCTAGAAACTGCAAACAACATAATCTGTAGGTGTATATTTGGAAGGAAGTATGATGGTGATGGTTGCAGATTTGGAGAACTTGGCAGGAGGATAATGGCTCAAGTTTTAGATCTTAGTATAGGAGATTTGTTTCCTTTGTTGGGTTGGGTTGATGTTCTCACTGGCCAAATTAAAAATTTTAAGGCCACTTTTGAAGAAATGAATGATTTCTTTGATAGTGTAATTGTCGAGCATAAGATGGCTACGAGGGACCCCAACAAGAAAGATTTCCTCGACATTCTCCTTCAACTTCAGGATGATGGTCGTTCAGAGTTAGACCTCACACAGAATGACTTAAAAGCACTGTTAATGGACATGTTTTTAGCAGGAAGTGACACAACTTCAACTACAGTAGAATGGGCTATGGCAGAGCTTGTAAAAAATCCAGCCATAATGAAGAAAGCACAGGAGGAGGTAAGGAGAATTGTAGGGAATAAATCAAAAATAGAGGATAGTGATGTCAATCAAATGGAGTACATGATATGTGTAATTAAAGAAACTTTGAGGATGCATCCAGCTGCTCCTCTTTTGGCTCCTAGAAAAACAACATCTAGTGTTAAACTCGGTGGGTATGATATTCCTGATAAAACAATGGTATATGTCAACACATGGGCAATCCATAGGGACCCTGAATTTTGGGAAATGCCAGAAGAGTTTCTACCTGAGAGATTTGAAAACAACAAAGTTGATTTCAATGGTCAAAACTTTCAATTTATCCCGTTCGGTTCTGGGAGAAGAAAATGCCCTGGTATGGCGTTTGGGCTTGCTTCCACCGAGTATATGCTTGCTAATCTTTTGTATTGGTTTGATTGGAAGCTAGCTCCAAATGGCGAATCTCTTCAAGACATAGACATGACTGAGAAATTTGGGATCACAGTCAACAAGAAAGTTCCTCTGTGTCTCCAACCAATAGCATACAATAATTTCGAAGAATAA 1566 0.3927 MLEGRMFQNLPYSFLKKVPHDLNATLFTFLSFFISMLLVFKFKVRRNKLNLPPSPPRLPIIGNYLQLGTLPHRSFQSLSQKYGPLIMLHLGQLPVLVVSSVHMAKEVMQTHDTVFASRPCMTSTKNLLYGCKDIAFASYGDTWRQKRKLCVIELLSQKRVQSIQFIREEEAASLVDKIRKAMSLSNGCYGVNLGEMLLETANNIICRCIFGRKYDGDGCRFGELGRRIMAQVLDLSIGDLFPLLGWVDVLTGQIKNFKATFEEMNDFFDSVIVEHKMATRDPNKKDFLDILLQLQDDGRSELDLTQNDLKALLMDMFLAGSDTTSTTVEWAMAELVKNPAIMKKAQEEVRRIVGNKSKIEDSDVNQMEYMICVIKETLRMHPAAPLLAPRKTTSSVKLGGYDIPDKTMVYVNTWAIHRDPEFWEMPEEFLPERFENNKVDFNGQNFQFIPFGSGRRKCPGMAFGLASTEYMLANLLYWFDWKLAPNGESLQDIDMTEKFGITVNKKVPLCLQPIAYNNFEE* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2409 521 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 Pfam Cytochrome P450 52 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 Coils Coil 516 521 - -
Mtr3g2409 521 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 20 516 - -
Mtr3g2409 521 SUPERFAMILY Cytochrome P450 52 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2409 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Mtr3g2409 521 PANTHER CYTOCHROME P450 71B11-RELATED 20 516 - -
Mtr3g2409 521 Gene3D Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2409 Mtr-Chr3 37906775 37908447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2409 25 514 Cytochrome P450 AT5G25140 43.145 8.44e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2409 K20617 - gmx:100803922 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3753 4 51328583 51330981 Mtr3g2409 3 37906775 37908447 PCT