Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2408 ATGGAGATGGAACGCATGGCTGAATTCTCTCGCAATTACATGGATCGCCCACCGAGAAAGAGAGCGCGATTGGGTTGGGACATCCCTGAAACCCCTAAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTATGCTCCTTCAGAACATAATATCACTAGTTCTCTGTTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGAGATGACGACAAAGATGGCCATTACATGTTTGAGCTTGGAGATAATTTAACTTCTCGCTATAGAGTCCACGGAAAAATGGGTGAAGGAACATTTGGACAGGTTTTGGAGTGCTGGGACAGAGAAAGGAAGGAGATGGTTGCCATTAAAGTTGTTCGTGCGATAAAGAAGTATCGAGAGGCAGCCATGATTGAAATTGAAATGCTGCAGCAACTTGGGAAACATGATAAAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGTTCATTTCCCATTGATCTTGTTCGCGAGATTGGAAGACAACTATTGGAATGTGTTGCATTCATGCATGACTTACACATGATCCATACTGATCTGAAGCCTGAAAACATTCTTCTGGTTTCATCAGAGTATCTTAAAATCCCCGACTACAAGAGTTCATCCAGAGCACCGTGCTCCTTTTACAAAAGAGTGCCCAAGTCAAGTGCCATAAAAGTTATTGATTTTGGAAGCACTACTTATGAACGAGAAAACCAGAATTACATTGTATCAACACGTCATTATAGGGCACCTGAAGTTATCCTTGGACTTGGGTGGAGCTATCCATGCGATGTTTGGAGTGTGGGTTGTATATTAGTCGAATTATGCACTGGTGAAGCTCTGTTTCAGACTCACGAAAATTTAGAGCATCTTGCCATGATGGAGAGGGTGCTTGGTCTTTTACCACAGCAGTTGTTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTCCGAAGGGGGAGATTGGACTGGCCAGAGGGTGCAAATTCCAGGGAGAGTATTAAAGCTGTAATGAAGCTTCCTCGACTGCAGAACCTTATAATGCAGCATGTTGATCATTCTGCTGGAGATCTTATACATCTTTTACAGGGGCTACTTAGATATGACCCATTTGAAAGAGTTACAGCTAGAGATGCTCTGAGACATCCATTCTTTATGAGAGATCACCTTAGGAGATGA 1281 0.427 MEMERMAEFSRNYMDRPPRKRARLGWDIPETPKAQVGLFCGQEVENISSYAPSEHNITSSLFKGVARNGSPPWRDDDKDGHYMFELGDNLTSRYRVHGKMGEGTFGQVLECWDRERKEMVAIKVVRAIKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSEYLKIPDYKSSSRAPCSFYKRVPKSSAIKVIDFGSTTYERENQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGLLPQQLLKRVDRHAEKYVRRGRLDWPEGANSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPFERVTARDALRHPFFMRDHLRR* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2408 426 Gene3D Phosphorylase Kinase; domain 1 81 174 - -
Mtr3g2408 426 SMART serkin_6 94 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2408 426 PANTHER KINASE AFC1 1 426 - -
Mtr3g2408 426 Pfam Protein kinase domain 94 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2408 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Mtr3g2408 426 CDD PKc_CLK 81 419 - -
Mtr3g2408 426 Gene3D Transferase(Phosphotransferase) domain 1 148 419 - -
Mtr3g2408 426 ProSiteProfiles Protein kinase domain profile. 94 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2408 426 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 426 - -
Mtr3g2408 426 SUPERFAMILY Protein kinase-like (PK-like) 81 422 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2408 Mtr-Chr3 37899033 37902988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2408 83 423 MAP Kinase Gene Family AT4G11330 28.080 1.48e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mtr3g2408 Pkinase 3.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2408 K08287 - gmx:100808961 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2408 3 37899033 37902988 Mtr3g2408 3 37899033 37902988 ECH