Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2398 ATGGCTAAGAACAACAACATCCACAATCACCTCTTACTCTTATCATTTTTGTCCCTTCTTTTCTCAATCCATGCTAAACTCACCCTTCACCCTTCAGACACAAAAGCTCTTTCAACTCTACAAAACAACCTAGGACTCAACCTTGATACTACTACAAACAACCTATGTAACAAGGAAGGTGTGTTCTGTGAGAGAAGACTCACCAACAATGAAAGCTATGCACTCAGAGTAACAAAACTTGTTTTCAAATCAAGAAAACTCAGTGGCATACTTTCACCAACCATTGGAAAACTCACAGAGCTGAAAGAAATCTCTCTTTCAGACAACAAACTCGTTGACCAAATACCAACCTCTATAGTTGACTGCAGAAAGCTTGAGTTTCTGAACCTTGCTAATAATCTTTTCTCTGGTGAAGTTCCTTCTGAATTCTCTTCTCTCATTCGTCTTCGCTTTCTTGATATCTCTGGAAATAAACTTTCTGGAAACTTGAATTTCCTTAGGTATTTTCCCAATCTGGAAACTCTTTCTGTTGCAGACAATCACTTCACAGGAAGAGTTCCAGTTTCGGTTCGTTCTTTTCGCAATCTTAGACACTTTAACTTCTCCGGTAACCGGTTCCTTGAAGGCGTGCCATTGAATCAGAAGCTTCTTGGATATGAAGATACTGATAATACTGCTCCCAAACGCTATATTCTTGCTGAGACTAATAATTCAAGTCAAACAAGGCCTCATAGGAGTCATTCCCCAGGAGCTGCTCCAGCTCCTGCTCCAGCTGCTCCTCTCCACAAACATAAGAAGAGTAGGAGGAAGCTAGCTGGATGGATTCTTGGGTTTGTTGCTGGAGCATTTGCTGGGATACTTTCTGGTTTTGTGTTTTCTTTGCTGTTTAAATTGGCTTTGATTTTGATCAAAGGAAAAGGAAAGGGTTCTGGACCTGCAATTTATAGTTCTTTGATTAAGAAAGCTGAGGATTTAGCTTTCTTGGAGAAAGAAGATGGTTTAGCTTCGTTGGAAAAAATTGGACAAGGTGGATGTGGTGAGGTTTACAAAGCTGAATTACCAGGAAGTAATGGAAAAATGATTGCCATTAAGAAGATTATTCAGCCACCGAAGGATGCAGCTGAGTTGGCTGAAGAAGATAGTAAGCTTTTGCATAAGAAGATGCGACAAATTAAGTCGGAGATTGACACAGTCGGTCAGATTCGTCATCGTAACCTTTTGCCGTTGTTGGCTCATATTTCTAGACCTGATTGTCATTATCTTGTGTACGAGTTCATGAAGAATGGAAGTTTGCAGGATATGTTGCACAAAGTTGAAAGAGGTGAAGCAGAGTTGGATTGGTTGGCAAGGCATAAGATTGCACTTGGTATTGCGGCTGGTCTTGAATACCTTCATACAAGCCATAGTCCGCGTATAATTCATCGAGATCTCAAGCCTGCAAACGTTCTTCTTGATGATGAAATGGAAGCTAGGATTGCGGATTTTGGTCTTGCAAAAGCTATGCCTGATGCACAGACGCATATCACCACTTCGAACGTGGCTGGTACGGTGGGATATATCGCACCTGAGTATCATCAGATACTCAAATTCAATGACAAGTGTGACATATATAGCTTTGGTGTTATGCTTGGTGTCTTGGTGATTGGAAAGCTTCCTTCTGATGATTTCTTTACGAACACAGATGAGATGAGTTTGGTCAAGTGGATGAGAAATGTGATGACTTCGGAAAATCCTAAGGAAGCAATTGATGCAAGGCTCTTAGGTAATGGTTTTGAGGAACAAATGCTTTTGGTTTTGAAGATTGCTTCCTTTTGCACCATGGATAATCCTAAGGAGAGGCCTGATGCTAAGAATGTTAGGATTATGTTGTACCAAATCAAGCACTAG 1887 0.407 MAKNNNIHNHLLLLSFLSLLFSIHAKLTLHPSDTKALSTLQNNLGLNLDTTTNNLCNKEGVFCERRLTNNESYALRVTKLVFKSRKLSGILSPTIGKLTELKEISLSDNKLVDQIPTSIVDCRKLEFLNLANNLFSGEVPSEFSSLIRLRFLDISGNKLSGNLNFLRYFPNLETLSVADNHFTGRVPVSVRSFRNLRHFNFSGNRFLEGVPLNQKLLGYEDTDNTAPKRYILAETNNSSQTRPHRSHSPGAAPAPAPAAPLHKHKKSRRKLAGWILGFVAGAFAGILSGFVFSLLFKLALILIKGKGKGSGPAIYSSLIKKAEDLAFLEKEDGLASLEKIGQGGCGEVYKAELPGSNGKMIAIKKIIQPPKDAAELAEEDSKLLHKKMRQIKSEIDTVGQIRHRNLLPLLAHISRPDCHYLVYEFMKNGSLQDMLHKVERGEAELDWLARHKIALGIAAGLEYLHTSHSPRIIHRDLKPANVLLDDEMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQILKFNDKCDIYSFGVMLGVLVIGKLPSDDFFTNTDEMSLVKWMRNVMTSENPKEAIDARLLGNGFEEQMLLVLKIASFCTMDNPKERPDAKNVRIMLYQIKH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2398 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Mtr3g2398 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 9 628 - -
Mtr3g2398 628 Gene3D Ribonuclease Inhibitor 20 219 IPR032675 -
Mtr3g2398 628 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Mtr3g2398 628 Coils Coil 374 394 - -
Mtr3g2398 628 Gene3D Phosphorylase Kinase; domain 1 323 425 - -
Mtr3g2398 628 SMART serkin_6 334 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2398 628 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Mtr3g2398 628 SUPERFAMILY Protein kinase-like (PK-like) 328 626 IPR011009 -
Mtr3g2398 628 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 628 - -
Mtr3g2398 628 Pfam Protein kinase domain 336 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2398 628 MobiDBLite consensus disorder prediction 236 263 - -
Mtr3g2398 628 SUPERFAMILY L domain-like 53 209 - -
Mtr3g2398 628 ProSiteProfiles Protein kinase domain profile. 334 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2398 Mtr-Chr3 37830854 37833164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2398 11 628 Receptor kinase-like Gene Family AT2G31880 62.898 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Mtr3g2398 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2398 - - gmx:100811980 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2398 3 37830854 37833164 Mtr3g2398 3 37830854 37833164 ECH