Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2383 ATGGCTGAATCAAACGGCGACGTATTCCCATGGTTAAAATCCATGCCAGTAGCTCCCGAATACCGACCCACTCCAGCTGAATTCGAAGATCCAATCGCATACATTTTCAAGATCGAAAACGAAGCTTCCAAATTCGGAATCTGCAAAATTATCCCTCCTTTTCCACCTTCTTCCAAAAAAACCACCATCTCTAACCTAAACCGTTCATTCCCTAACTCCACATTCACCACCCGTCAACAACAGATCGGGTTCTGTCCCCGTAAACCCCGACCCGTTAAACGACCCGTTTGGCAGAGTGGGGACCACTACACTTTCTCTGAGTTTGAAGCCAAAGCAAAATGGTTCGAAAGAAGTTACATGAACAAGAAGAAGAAAAACAGTAACAGTGCTCTTGAAATAGAGACATTGTTCTGGAAAGCTACGGTGGATAAACCGTTTTCTGTTGAGTATGCTAATGATATGCCGGGTTCTGCTTTCGCGGACACGGTGGAGAATAATAATAAACCGTTTTCTTCAGTTGCTAATAGTACTTGGAATATGAGGAGGGTTTCAAGGGCCAAAGGGTCTTTGTTGAGGTTTATGAAGGAGGAGATACCCGGAGTTACTTCGCCCATGGTTTATCTTGCTATGCTTTTTAGTTGGTTTGCTTGGCATGTGGAGGATCATGATTTGCATAGCTTGAATTATCTTCATATGGGTGCTTCTAAGACTTGGTATGGTGTTCCTAGAGATGCTGCTGTTGCTTTTGAAGATGTTGTTAGAGTTCATGGATATGGTGGAGAGATCAACCCTCTTGTTACATTTTCTATTCTTGGTGAGAAGACCACAGTGATGTCACCAGAAGTGTTTATTAGCGCAGGTGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGGGAATTTGTTGTGACATTTCCAAGAGCCTATCACACGGGGTTCAGTCATGGTTTTAATTGTGCAGAGGCGGCAAACATTGCAACACCCGAGTGGTTGAGAGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATAAACTATTCTCCCATGGTTTCACATTTACAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATCCCTGGGGGAATCAGTGCGGCACCTCGGAGTTCTCGACTTAAAGATAAGAAGAAGGGTGAAGGAGAAGCTGTAATTAAAGAACTATTTGTCCAGGATGTGTTACAAAACAATGATCTGCTTCATGTCCTCGGAAATGAGTCTTCTGTAGTACTTCTTCCTCGCAACTCAGTTGACATCTCTAGTTGCTCAAAATTACGTGTTGGATGCCGGCCACCAAAAGTGAACCCTGGATTTTCCTTTGATGTATGCAATTCTGAGGGACTGAGTTCATCAAAAGGTTTTGTTTCTGATGATCTGGTATTCGACAGGAATCGCGGAATTGCCCAAGAAAAAAACTTATGTTCTGTGAATGATGAACTTACTCTGTTGTCCGAAGGGAAGGGGATTCCCTCGTTGGATGCAAATGGTAACAAATCCCCTTCAAGTTCTAAGCAACTTCAAAGAGACAGTGAAAGTGAGACTAGTCAAGGAGATGGATTGTCAGAGCAGAGACTGTTTTCGTGTGTCACGTGTGGACTATTAAACTTTTCCTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGGTATCTTATGTCTGCTGATTGCAGCTTCTTTAATGATTGGGTTGCTGCCTCTGGATTACCTGGTAGCAATAAATATACTGCCCCCCATGAAGATGCACATATTCCCGAGCCAAATATGTATGCAGGGTGGACAAAGAAAAATGCCCAAGAAGAGGCCTTACATTCCGAAGGAGAAAATGGCAATACAGCAGCTACAGCTCTTGCATTATTGGCTTCAGCATATGGAAGTTCTTCTGACTCTGAGGAAGATGCAGTTGACGGCCATGAATCAAATGCAATAAACTTTACATCAGAAAGTTTGCCTTCTAATTTTTGTGATTCCAATGATAATCCCATGACAATACTTGATAAAGATGATACCCTTTCAGAGAGTGCCAGCTACGAAGCACACAGAAATGAGTGTAATTTGAGTCATCATCCTCGGGATCAATCTTTTGAGGAACAGGATTATAAAATCACTTCAGGGGCTGCATTTGAAAATACAAGGGCAATGCCTTATTCCACAACATATAGTTCCCGTGATACTAATGACGCTGAGAAGTCATTGTCAATCGAGGCAATTGTTCCTGTAAATCATAAAAATGTTTTACTGGTACCACAATGCGATGAAGAGTCGTCTAGAATGCATGTATTCTGTCTAGAGCATGCTGTAGAAGCAGAGCAGCAACTACGCCCAATAGGTGGAGCCCACATATTGCTCTTATGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCACAGTTGGTGGCAGAAGATTTGGGGATTGATTGCACGTGGAAGAATATTGCCTACAGGCATGGCACCAAGGAGGATGAGAAAAGGATCCAGTCAGCTCTGGATAGTGAGGAAGCGAGTCTCGGGAATGGGGACTGGACTGTAAAGCTAGGAATAAATCTCTTTTATAGTGCAAGTCTTAGCCGCTCTCCCCTTTATAGCAAGCAGATGCCTTACAATTCCGTTATATATTATGCATTCGGTCGTAGCTCTCCAGCAAGCTCACCGATAGAACCAAAGGTTTATCAGAGAAGGGCTGACAAGCAGAAAAAGGTTGTTGCTGGCAAATGGTGTGGTAAAGTTTGGATGTCTAATCAGGTCCATCCCCTTTTAGCAATAAGGGATTCTGAATATGTTGAGGATGAGAGAAGTTTACGTGGATTGGTATTGCCTGATGTGAAAATTGAGAGATCGGGAAGTACCCCCAAAACTGCAACGGCTATCACAAAATCAGGTAGGAAAAGGAAAACAACCTCAGAGAGTAGACGGCGAATCAGGAAGGGAAATTTTGATGATAAGGATGTGGTTTTGGATAATTCTGCTGAAGATGAACCCAGTCCTCGGCCAAGAAGGTTTCTTAGAAGCAAGCAAGCTAAGGGTGTTGAGAAAGATGGTGCAGCTTTGCAGAGGAATTGTTCTCCATATCATCATAGAAAACCTATAAGCAAACAAACCAATTGCACTGAAAGTGATGTAGTTTCTGATGATTCGATTGATGATGATTACATGCAAAATAGATGGAGTTTTAATGTCAAAAAAGCTAAATTTGCTGGCAATGAAGTGGTTTCAGATGATGCAGAGGACTATGATTCTGATTGTCATCAGATGGAAGAACTTAGAAGTAATCAAGATGAAGGTACAGAGAGAGATTCGGTTTCAGAGGATTCTTTGGATGTTGGTTCTCTTCCGTTGCACAGAAAGACTTCCAGAAGCAAGCATGCCGACTATATTGGTGAAGATGCAATTTCTGATGACCAAATGGAGAGTGGTTGTCAGAAGCAGAAAAAGAGAATTGCTAAAAGCTGGCAAGGCAAATACCTTGCTGAAAAAGATTCAGTGATATCAGATGACCAACTGGAGCTGAACAAGCTGAAGCAGCAACGGGGTAATCCTAAAAGTAGGAAAGCCAGAAACCTTGCCAATGAGGATGCTGTGTCAGACGATCAAACAAATGTCTATCGTCGCAAGTACCAAAGAAGGGCAGTTAAAGTCAGGCAAGCCAAATGTGTAGCAGAGGAAGATGTAATGTCTGACGACCAATTGGAGGTTTCCTATCAAAGGCATAAAACAGGTATTTCTAGAAGGAAGAACAAAGGCATTGATAGAGTGAAAAATGAAATGTCTGATGATCAACTGGATGATCACTTTCAGAAGCAGCAGAGAAAAAATCCTAGGAGCAGGCACATTAAACAGACTGATGAGGAAGATATCGATGACTCAGCTGACAATAATGCTCATCTGCTGCATAGAAACCCTAAAAGGAAGAAAGCTAAATGCAAGGATGAAGATCATATGATTTTAGATAACGAAATGGAAGATGATTCTCTTCAGCAGCGCAAGAGAACTCTTCCAAGTAAACAATCCAAACGAAAGACACTTAAACAGATGAAACAATCCAAAACTCTCCAAATGAAAAACCAGACACCTCAGCCAGTGAAACGAGGAGCTCAGAAGAATGCCAAGCAAGTAAAGCAGCCGTCTCATTTGCGGAGTAATCTTTCTGACAACTCCAGAGAGCCTAGTATAGATATGGAAGAGGACGAAGAAGGTGGACCTAGTACACGCCTTAGAAAGAGAGTCTTAAAAGCTCAGGAGTCTGAAGTAAAATCAAAAGACAGGGAAACCAAAAGGAAAAGGGCAAATGGTGTTGCAGCTGCAAAGGTTTCAGCTTGCAATCCCAAATCAGAGGACGAGGAAGCAGAATATCAGTGTGACATTGAGGGATGCACCATGAGTTTTGAGTCAAAAGACGAGTTGGTGCATCATAAGAGAAACATCTGTCCAGTAAAAGGTTGCGGAAAAAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGGCGAGTTCATGAAGATGACCGTCCTCTGAAGTGCCCCTGGAAGGGTTGCAAGATGTCTTTCAAGTGGGCATGGGCTCGAACCGAGCATATTCGAGTTCACACCGGTGCACGACCTTATGCATGTGCCGAGCCAGGTTGTGGTCAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTTAGCGAAGAAGATTCGTCAATAG 4719 0.4276 MAESNGDVFPWLKSMPVAPEYRPTPAEFEDPIAYIFKIENEASKFGICKIIPPFPPSSKKTTISNLNRSFPNSTFTTRQQQIGFCPRKPRPVKRPVWQSGDHYTFSEFEAKAKWFERSYMNKKKKNSNSALEIETLFWKATVDKPFSVEYANDMPGSAFADTVENNNKPFSSVANSTWNMRRVSRAKGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYSPMVSHLQLLYDLALALCSRIPGGISAAPRSSRLKDKKKGEGEAVIKELFVQDVLQNNDLLHVLGNESSVVLLPRNSVDISSCSKLRVGCRPPKVNPGFSFDVCNSEGLSSSKGFVSDDLVFDRNRGIAQEKNLCSVNDELTLLSEGKGIPSLDANGNKSPSSSKQLQRDSESETSQGDGLSEQRLFSCVTCGLLNFSCVAIVQPREPAARYLMSADCSFFNDWVAASGLPGSNKYTAPHEDAHIPEPNMYAGWTKKNAQEEALHSEGENGNTAATALALLASAYGSSSDSEEDAVDGHESNAINFTSESLPSNFCDSNDNPMTILDKDDTLSESASYEAHRNECNLSHHPRDQSFEEQDYKITSGAAFENTRAMPYSTTYSSRDTNDAEKSLSIEAIVPVNHKNVLLVPQCDEESSRMHVFCLEHAVEAEQQLRPIGGAHILLLCHPDYPKIEAEAQLVAEDLGIDCTWKNIAYRHGTKEDEKRIQSALDSEEASLGNGDWTVKLGINLFYSASLSRSPLYSKQMPYNSVIYYAFGRSSPASSPIEPKVYQRRADKQKKVVAGKWCGKVWMSNQVHPLLAIRDSEYVEDERSLRGLVLPDVKIERSGSTPKTATAITKSGRKRKTTSESRRRIRKGNFDDKDVVLDNSAEDEPSPRPRRFLRSKQAKGVEKDGAALQRNCSPYHHRKPISKQTNCTESDVVSDDSIDDDYMQNRWSFNVKKAKFAGNEVVSDDAEDYDSDCHQMEELRSNQDEGTERDSVSEDSLDVGSLPLHRKTSRSKHADYIGEDAISDDQMESGCQKQKKRIAKSWQGKYLAEKDSVISDDQLELNKLKQQRGNPKSRKARNLANEDAVSDDQTNVYRRKYQRRAVKVRQAKCVAEEDVMSDDQLEVSYQRHKTGISRRKNKGIDRVKNEMSDDQLDDHFQKQQRKNPRSRHIKQTDEEDIDDSADNNAHLLHRNPKRKKAKCKDEDHMILDNEMEDDSLQQRKRTLPSKQSKRKTLKQMKQSKTLQMKNQTPQPVKRGAQKNAKQVKQPSHLRSNLSDNSREPSIDMEEDEEGGPSTRLRKRVLKAQESEVKSKDRETKRKRANGVAAAKVSACNPKSEDEEAEYQCDIEGCTMSFESKDELVHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMSFKWAWARTEHIRVHTGARPYACAEPGCGQTFRFVSDFSRHKRKTGHLAKKIRQ* 1573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1093 1109 - -
Mtr3g2383 1572 ProSiteProfiles JmjC domain profile. 172 341 IPR003347 -
Mtr3g2383 1572 ProSiteProfiles Zinc finger C2H2 type domain profile. 1479 1508 IPR013087 -
Mtr3g2383 1572 Gene3D Cupin 11 345 - -
Mtr3g2383 1572 SUPERFAMILY beta-beta-alpha zinc fingers 1519 1561 IPR036236 -
Mtr3g2383 1572 PANTHER LYSINE-SPECIFIC DEMETHYLASE 5 1036 - -
Mtr3g2383 1572 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1141 1562 - -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1243 1435 - -
Mtr3g2383 1572 ProSiteProfiles Zinc finger C2H2 type domain profile. 1509 1538 IPR013087 -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1093 1125 - -
Mtr3g2383 1572 ProSiteProfiles Zinc finger C2H2 type domain profile. 1539 1570 IPR013087 -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1250 1302 - -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 953 1046 - -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1402 1435 - -
Mtr3g2383 1572 ProSitePatterns Zinc finger C2H2 type domain signature. 1541 1565 IPR013087 -
Mtr3g2383 1572 ProSitePatterns Zinc finger C2H2 type domain signature. 1481 1503 IPR013087 -
Mtr3g2383 1572 Pfam JmjC domain, hydroxylase 205 323 IPR003347 -
Mtr3g2383 1572 SUPERFAMILY Clavaminate synthase-like 150 337 - -
Mtr3g2383 1572 SUPERFAMILY beta-beta-alpha zinc fingers 1479 1515 IPR036236 -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 977 1017 - -
Mtr3g2383 1572 Gene3D Classic Zinc Finger 1477 1563 - -
Mtr3g2383 1572 ProSiteProfiles JmjN domain profile. 18 59 IPR003349 -
Mtr3g2383 1572 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 5 1036 - -
Mtr3g2383 1572 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1141 1562 - -
Mtr3g2383 1572 SMART c2h2final6 1509 1533 IPR013087 -
Mtr3g2383 1572 SMART c2h2final6 1479 1503 IPR013087 -
Mtr3g2383 1572 SMART c2h2final6 1456 1478 IPR013087 -
Mtr3g2383 1572 SMART c2h2final6 1539 1565 IPR013087 -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 493 524 - -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1032 1046 - -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1310 1334 - -
Mtr3g2383 1572 SMART JmjN_1 17 58 IPR003349 -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 1351 1392 - -
Mtr3g2383 1572 Pfam jmjN domain 19 52 IPR003349 -
Mtr3g2383 1572 ProSitePatterns Zinc finger C2H2 type domain signature. 1511 1533 IPR013087 -
Mtr3g2383 1572 MobiDBLite consensus disorder prediction 500 524 - -
Mtr3g2383 1572 SMART cupin_9 172 341 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2383 Mtr-Chr3 37705066 37714731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2383 763 864 C2H2 Transcription Factor Family AT5G04240 33.333 4.14e-14 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr3g2383 JmjC 3.1e-36 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2383 3 37705066 37714731 Mtr3g2383 3 37705066 37714731 ECH