Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2369 ATGGCCAATACCAACCACACTCTAATGCAGTCACAATCCACCACCATCGACCCAAACACCGGTTACTGTTCTCATTCTAGAACCTTCCACAGCCTCCGTCCAATCGCCCCTCTCCCTCCACCCTCAGAACCTCTCTCCCTAACCGACTATGCACTCTCTCTCCTCTCAACTACCACTGCCGTCTCCAACAACACCACCGCCCTCATCGACGCCGCTACCGATCACCACCTCACTTATCCCACCTTCCTCCGCCAAATCAAATCTCTATCTTCATTCCTTCAATCCCACACTACTCTCTCCAAAGGCCACGTTGCTCTCATCCTCATCCCTTCTTCCATACACGTCCCCGTACTCTATTTCTCCCTCCTCTCCCTCGGCGTCACCATCGCTCCTGCTAACCCACTCTCCTCCCCGTCAGAGTTATCTCATCTCGTTCATCTCATCAATCCCGTCATCGCATTCTCCACTTCCTCAACCGCAACAAAAATCCCTAAACTACCCCTAGGCACTGTCATAACTGATTCTCCTTCTTTTCTTTCCGTGATCAATTCCACCACTGATACTCATACTGAACTTCGCCCGGTTGTAACAAGTCAATCAGATACAGCAGCAATCCTCTTCTCATCCGGAACAACGGGACGAGTCAAAGGAGTATTATTAACTCACGGTAACTTCATAGCTTTAATCGGAGGATTCTGTTTCATGAAGCACGCTTATGATGACGGTATTGAAGATGAACCGCATCCGGTGTCGTTGTTTCCGCTTCCGCTATTTCATGTGTTTGGGTTTTTTATGATGGTGAGAGCTTTGGCAATGGGGGAGACGTTGGTATTGATGCAGAGGTTTGATTTTGAAGGGATGTTGAAGGCGGTTGAAAAGTATAGGATTACGTATATGCCAGTGTCGCCGCCGTTGATTACGGCGTTTACTAAGTCGGAGTTGGTGAAGAAGTATGATATTAGTTCGATTCGGTTGCTTGGGAGCGGTGGTGCGCCGCTTGGGAAGGAGGTTGCGGAGAGCTTCAAAGCTAAATTCCCCAATGTGGAAATTGTGCAGGGATATGGTCTGACTGAAAGTGGAGGAGGGGCAGCAAGAATGATAGGTTTTGATGAAGCTAAGCGCCACGGTTCTGTGGGTCGACTAGCAGAAAATATGGAAGCTAAGATAGTTGACCCTGTTACTGGAGAGGCATTATCTCCTGGCCAGAAAGGGGAGCTTTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCGACTGTTGAGACATTGGATTCAGAGGGATGGCTGAAGACCGGAGATCTTTGTTATTTTGACTCAGATGGTTATCTGTTCATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTAGAGCACATACTTCATACCAATCCTGAAATTGCTGATGCTGCAGTAGTCCCGTATCCTGATGAAGATGCAGGGCAAATTCCAATGGCTTTTGTGGTAAGAAAGCCGGGAAGCAACATCACTGCAGCTCAGGTCATGGACTATGTTGCGAAGCAGGTGACACCGTACAAGAAGATACGACGTGTTTCTTTTATCAACTCTATTCCAAAATCTCCAGCTGGCAAAATTTTAAGAAGGGAATTAGTTGATATTGCTCTAACTAGTGGTTCATCTAAATTGTGA 1689 0.4701 MANTNHTLMQSQSTTIDPNTGYCSHSRTFHSLRPIAPLPPPSEPLSLTDYALSLLSTTTAVSNNTTALIDAATDHHLTYPTFLRQIKSLSSFLQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGVTIAPANPLSSPSELSHLVHLINPVIAFSTSSTATKIPKLPLGTVITDSPSFLSVINSTTDTHTELRPVVTSQSDTAAILFSSGTTGRVKGVLLTHGNFIALIGGFCFMKHAYDDGIEDEPHPVSLFPLPLFHVFGFFMMVRALAMGETLVLMQRFDFEGMLKAVEKYRITYMPVSPPLITAFTKSELVKKYDISSIRLLGSGGAPLGKEVAESFKAKFPNVEIVQGYGLTESGGGAARMIGFDEAKRHGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGYLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILRRELVDIALTSGSSKL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2369 562 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 551 - -
Mtr3g2369 562 SUPERFAMILY Acetyl-CoA synthetase-like 50 555 - -
Mtr3g2369 562 Pfam AMP-binding enzyme 62 460 IPR000873 -
Mtr3g2369 562 Gene3D - 456 556 IPR045851 -
Mtr3g2369 562 CDD 4CL 65 550 - -
Mtr3g2369 562 Gene3D - 42 455 IPR042099 -
Mtr3g2369 562 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 29 551 - -
Mtr3g2369 562 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
Mtr3g2369 562 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2369 Mtr-Chr3 37515041 37519894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2369 11 562 Monolignol Biosynthesis Gene Families AT5G63380 59.715 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2369 K01904 - gmx:100804044 832.402