Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2368 ATGGCCAATACTAACCCCACTCTAACACAGTCACACTCCAATAACACCATCGATCTAAACACCGGTTACTGTTCTCTTTCTAGAACCTTCCATAGCCTCCGTCCAATCGCCCCTCTTCCTCCACCCTCCCAACCTCTCTCCCTCACCGAATATGCACTCTCTCTCCTCTCCACCACCACTGCCGTGTCCAACAACACCACCGCCCTCATCGACGCCACCACCGACCACCATCTCACTTACCCAACCTTCCTCCGCCAAATCAAATCCCTCTCTTCATTCCTCCAATCACACACTACTCTATCCAAAGGCCACGTCGCTCTCATCCTCATCCCTTCTTCCATACATGTCCCCGTACTCTATTTCTCCCTCCTCTCCCTCGGCGTCACCATCGCTCCTGCCAATCCACTCTCTTCACCTTCAGAGTTATCTCATCTCGTTCATCTCATCAATCCCGTCATCGCATTCTCCACCTCCTCAACTGCAACAAAAATCCCTAAACTACCCCTCGGCACAGTCATCTTTGATTCTCCTTCTTTTCTTTCCGTGCTCAATTCCACCATTGATACTGATACCGAACTTCGCCCTGTTGAAACAAGTCAATCAGACACAGCAGCTATCCTCTTCTCATCCGGAACAACCGGACGAGTCAAAGGAGTATTATTAACTCATCGTAACTTCATCGCTTTAATTGGAGGATTTTGTTTCCTAAGGCACGGGATTGAAGATCATGAACCGCATCGGGTGTCGTTTTTTCCGCTTCCGCTTTTTCATGTAATTGGATTTTTTATGATGGTGAGAACTATGGCTATGGGGGAGACGTTGGTGTTGATGCAGAGGTTTGACTTTGGAGGGATGTTGAAGGCGGTTGAGAAGTATAGGATTACACATATGCCAGTTTCGCCGCCGTTGATTACGGCCTTTACTAAGTCGGAGTTGGTGAAGAAATACGATGTTAGTTCGATTCGATCGTTAGGATGCGGTGGTGCGCCGCTAGCAAAGGAGGTTGCGGAGAGTTTCAAAGCTAAATTCCCCAATATGGAAATTGTGCAGGGATATGGTCTGACTGAAAGTGGAGGAGCGGTAGCAAGAATGATAGGTTATGATGAAGCTAAGCGCCACGGTTCTGTGGGTCGACTAGCAGAAAATATGGAAGCCAAGATAGTTGACCCTGTTACTGTTGAGGCATTATCTCCTGGTTATAAAGGGGAGCTTTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCGACTGTTGAGACGTTGGATTCAGAGGGATGGCTGAAGACTGGAGATCTTTGTTATTTTGACTCAGATGGTTATCTGTTCATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTAGAGCACATACTTCATACCAATCCTGAAATTGCTGATGCTGCAGTAGTCCCGTATCCTGATGAAGATGCAGGGCAAATTCCAATGGCTTTTGTGGTAAGAAAGCCGGGAAGCAACATCACTGCAGCTCAGGTCATGGACTATGTTGCGAAGCAGGTGACACCGTACAAGAAGATACGACGTGTTTCTTTTATCAACTCTATTCCAAAATCTCCAGCTGGCAAAATTTTAAGAAGGGAATTAGTTGATATTGCTCTAACTAGTGGTTCATCTAAATTGTGA 1683 0.4635 MANTNPTLTQSHSNNTIDLNTGYCSLSRTFHSLRPIAPLPPPSQPLSLTEYALSLLSTTTAVSNNTTALIDATTDHHLTYPTFLRQIKSLSSFLQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGVTIAPANPLSSPSELSHLVHLINPVIAFSTSSTATKIPKLPLGTVIFDSPSFLSVLNSTIDTDTELRPVETSQSDTAAILFSSGTTGRVKGVLLTHRNFIALIGGFCFLRHGIEDHEPHRVSFFPLPLFHVIGFFMMVRTMAMGETLVLMQRFDFGGMLKAVEKYRITHMPVSPPLITAFTKSELVKKYDVSSIRSLGCGGAPLAKEVAESFKAKFPNMEIVQGYGLTESGGAVARMIGYDEAKRHGSVGRLAENMEAKIVDPVTVEALSPGYKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGYLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILRRELVDIALTSGSSKL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2368 560 Pfam AMP-binding enzyme 63 458 IPR000873 -
Mtr3g2368 560 Gene3D - 454 554 IPR045851 -
Mtr3g2368 560 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 30 549 - -
Mtr3g2368 560 SUPERFAMILY Acetyl-CoA synthetase-like 50 553 - -
Mtr3g2368 560 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Mtr3g2368 560 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Mtr3g2368 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 30 549 - -
Mtr3g2368 560 CDD 4CL 66 548 - -
Mtr3g2368 560 Gene3D - 43 453 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2368 Mtr-Chr3 37505246 37512656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2368 8 560 Monolignol Biosynthesis Gene Families AT5G63380 59.469 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2368 K01904 - gmx:100804044 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2368 3 37505246 37512656 Mtr3g2368 3 37505246 37512656 ECH