Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2361 ATGGCTACTCTCACCTCCCTCCCTCCACTTCCTCACTCCCTCCTCTCCCTCCGCTCTAAACCAACCAGACTCTCCGTTTCAGCTTCAGCACTCTCAGCCTCAGGAAATGATGGATCTACTTCTAGGGTACCACAAAAAAGAAGGAGAAGAATTGAAGGTCCAAGAAAAAGTATGGAAGATTCTGTTCAACGTAGGATGGAGCAATTTTATGAAGGAAATGACGGACCACCTTTACGTGTTCTTCCTATTGGTGGTTTAGGTGAAATTGGAATGAACTGTATGCTCGTTGGGAATCATGACCGTTATATCCTCATTGATGCTGGTATCATGTTTCCTGACTATGATGACCTCGGAGTACAAAAGATTATACCTGATACAACGTTTATAAGAAAATGGAGCCACAAAATTGAAGCGCTTGTTATAACACATGGTCATGAAGATCATATTGGTGCGTTGCCCTGGGTCATCCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAGCATGGTATTTTCCTTCCATCTAGACTCAAAATATTTAGAACAAAGAACAAGTTTGTCGCTGGGCCATTTGAAATAGAACCAATCAGGGTGACTCACTCTATTCCCGACTGTTGTGGACTAGTTCTTCGTTGTTCTGATGGGACTATTCTTCACACTGGGGATTGGAAGATTGACGAGACACCACTTGACGGGAAAGTTTTTGATCGGGAGGGTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTGCTCTCACCTGGAAGGACAACCAGTGAATCAGTTGTGGCAGATTCATTATTGAGGCATATTTCAGCTTCAAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATCTACATCGGATTGGAAGTGTCAAAGCGGCTGCTGATTTAACTGGGAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATACTTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCATTTGACCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCTAAGGATCTGCTTATTGTAACAACTGGCTCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATCTTTTGGAAGTAGCCATGCTTTCAAACTTACAAAGGAAGATATTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCCCGTGTGATGGAAATGATGAATCGCATATCAGAGATTGGATCAACAATAGTTATGGGGAGAAATGAAAACTTGCACACATCTGGACATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATTGTGAAGCCGCAACATTTTCTTCCTGTACATGGAGAATACTTGTTCCTGAAGGAGCATGAATCACTTGGAAAATCAACTGGCATTCGGCATACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTGAGAAATAGAAGGGTTCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAAAATTTACAGTTGAAATATAGTGATGGTGACAAAGCATTCGGTACATCCGGTGAACTCTTCCTTGATGAAAGAATGAGAATTGCATTAGATGGCATCATCGTGGTTAGCATGGAAATATTTCGCCCTAAAAATTTAGAAAGTTTGGCTGGAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGTCTATGGCTGGACAAAGGGAAGCTGTTAGATGCACTGTATAAAGCTGCTCATGCAGCTCTTTCTAGTTGTCCTGTCAAAAGTCCACTGCCTCACATGGAAAGAACTGTGTCAGAGGTGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTAATTGCCATTGCCATAGAAAATCCTGGAGCTGTTTTTGCTGATGAGATAAACACAAAATTGTCTGGCAAATCCCAAGTTGGTCCTGGAATATCAACATTTAGAAGATCAGTGGATGAACATAGAAAGGAAAACCAGTCCACCGCACTGCAAATAAGAGATGATGGCATTGATATAGAAGGACTATTAGTTGAGATAGAGACCATTACAACTGCAGCTGAAGGCGATTTATCTGATTCAGGGGAATCGGATGAATTTTGGAAGCCATTCATTGCATCATCAGTTGAGAAATCAATCAAAGCAAACAATGGTTATGTTTCACGAAAGGAGCATAAGTCAAATACAAAGCAAGATGATTCTGAAGACATAGATGAAGCCAAGTCTGAAGAAATGTCTGATTCTGAGCCAGAGTCTTCAAAATCAGAAAAGAAAAATAAATGGAAAACTGAGGAAGTTAAGAAGCTAATTGATTTGCGAAGTGACCTCCGTGACAGATTTAAAGTTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAATGCAAATCTTTGTGGACATCTTTGGCACTTAAATATGAGGAGATCAAGAATGGGAAAGATAGCAGAAAAAATTGGCAATATCTTGAGGACATGGAAAGGATATTGTCTAGTGATGAAACACCGGCAACAAATTGA 2604 0.4094 MATLTSLPPLPHSLLSLRSKPTRLSVSASALSASGNDGSTSRVPQKRRRRIEGPRKSMEDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGIMFPDYDDLGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLPSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREGLEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISASKGRVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDIVLYSAKVIPGNESRVMEMMNRISEIGSTIVMGRNENLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSGELFLDERMRIALDGIIVVSMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPVKSPLPHMERTVSEVLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSGKSQVGPGISTFRRSVDEHRKENQSTALQIRDDGIDIEGLLVEIETITTAAEGDLSDSGESDEFWKPFIASSVEKSIKANNGYVSRKEHKSNTKQDDSEDIDEAKSEEMSDSEPESSKSEKKNKWKTEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEIKNGKDSRKNWQYLEDMERILSSDETPATN* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2361 867 MobiDBLite consensus disorder prediction 26 41 - -
Mtr3g2361 867 SMART Lactamase_B_5a 90 287 IPR001279 -
Mtr3g2361 867 MobiDBLite consensus disorder prediction 735 775 - -
Mtr3g2361 867 Pfam Beta-lactamase superfamily domain 101 237 IPR001279 -
Mtr3g2361 867 PANTHER RIBONUCLEASE J 1 863 - -
Mtr3g2361 867 MobiDBLite consensus disorder prediction 761 775 - -
Mtr3g2361 867 Pfam Myb/SANT-like DNA-binding domain 774 857 IPR044822 -
Mtr3g2361 867 CDD RNaseJ_MBL-fold 81 492 - -
Mtr3g2361 867 SUPERFAMILY Metallo-hydrolase/oxidoreductase 78 492 IPR036866 -
Mtr3g2361 867 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 429 481 IPR011108 -
Mtr3g2361 867 MobiDBLite consensus disorder prediction 735 751 - -
Mtr3g2361 867 Gene3D - 82 494 IPR036866 -
Mtr3g2361 867 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 863 - -
Mtr3g2361 867 MobiDBLite consensus disorder prediction 26 61 - -
Mtr3g2361 867 Gene3D - 776 837 - -
Mtr3g2361 867 CDD GT1 774 839 - -
Mtr3g2361 867 ProSiteProfiles Myb-like domain profile. 768 832 IPR001005 -
Mtr3g2361 867 MobiDBLite consensus disorder prediction 42 61 - -
Mtr3g2361 867 Gene3D - 279 429 IPR042173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2361 Mtr-Chr3 37445120 37454451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2361 775 860 Trihelix Transcription Factor Family AT2G38250 31.818 4.58e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr3g2361 Lactamase_B_2 1.5e-09 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2361 - - gmx:100783850 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2361 3 37445120 37454451 Mtr3g2361 3 37445120 37454451 ECH
Mtr4g3712 4 50871379 50879475 Mtr3g2361 3 37445120 37454451 PCT