Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2357 ATGGTTTCAACGAGACGCAACAGTGGTGGATCTTTCCCCAACAACAACAACAACTCCGGTAAACGACCTTCATCTTCTTCCGATGACAAACCTCCTTCTTCTCCTTCATCTAAACGCCAAAAGCCTGATAATGGCGCTGCTTCATCGGAGAAACCGCCGGAAAATTCAAATCCAGAACCGTCTGCCGATCCCGGAAAATGTGCTCAACCTGATGCTCAGATCGATGAACCTGTAGCAGCTGCTGATGATGACAAAGCCGATACAACTCCGCCAATTGCTGATGCTTCTACGCCGACTCTGGTAGCTGATAAACCCAGAGCTTCGTTTTCTTCGTGGAGTTTATATCAGAAGCAAAACCCGAACCTCGAGTCTTCAGCTCCGTGGTGCCGGCTTTTGTCACAGTCTGCTCAGCATCCGAATGTTTCCATTTGCATACCGAATTTCACTATTGGCTCGAGTAGAAATTGCAACTTTCATTTGAAGGATCATACGATAAGTGGAAATTTATGCAAGATCAAACATACACAGCGCGAGGGAAGTGACGTGGCTGTGCTAGAGAGTACGGGTAGCAAAGGATCTGTGATAGTTAATGGGACACTTGTCAAGAAGAGTACCTGCTGCACGCTTAACTCAGGCGATGAGGTGGTTTTCGGCTTGCATGGAAATCATTCTTACATTTTCCAGCAAGTAAACACCGAGGTTGCAGTTAAGGGTGCAGAAGTTCAGAGTGGCATTGGTAAATTTATGCAGCTTGAAAGGAGAAGCGGAGACCCTTCAGCCGTGGCTGGGGCTTCTATCTTGGCATCTCTTTCTAATCTCAGACAGGATCTTACAAGATGGAAGTCTCCATCTCAAACTGCCAGTAAACCTCACCAGGGTGCTGATGTTTCTATTCATACTGTTCTCCCTGATGGTACAGAAATTGAGCTTGATGGCCTGGGCAACTCAACTCCAAGCATGGGAACTGATAAAGCTGCCGATGCTGAGGCTAGCAACAAGAACACTCCTATGGATTGCGATCCAGAGGATGCGGGCGCAGAGCCAGGCAATGTAAAATACTCTGGGGTGAATGATTTGCTAAGGCCTTTCTTCAGGATTCTAGCTGGATCTACTACTTGTAAACTAAAATTGAGCAAAAGTATCTGTAAACAGGTATTGGAAGAAAGAAATGGGGCGGAGGACACACAAGCTGCATCGACTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATGCTCATGCTGCAATACTGGATGGAAAAGAACAAGAGGTGTCCTTTGACAACTTCCCATACTATTTAAGTGAGAATACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACCTGAAGCATAAAGAACATGCAAAGTACACCGCAGATCTTCCCACCGTAAACCCTCGTATTCTACTCTCAGGACCTGCAGGGTCAGAAATATATTCGGAGATGCTTGTAAAAGCACTTGCGAAATACTTTGGTGCTAAATTGCTTATATTTGATAGTCAATTGCTTTTGGGTGGTTTATCTTCTAAGGAAGCTGAGCTGCTCAAAGATGGGTTTAATGCTGAGAAATCTTGCAGCTGCCCCAAACAAAGTCCTACAGCCACAGACATGGCTAAGAGCACGGATCCACCAGCTAGTGAAACAGACACACCTAGCTCTTCAAATGTTCCTACTCCACTTGGCCTTGAATCTCAAGCTAAGTTGGAAACTGATAGTGTACCATCTACGTCTGGGACAGCTAAAAATTGCTTGTTTAAACTAGGCGACCGGGTTAAATATAGTTCATCTTCTGCTTGTTTGTATCAGACATCTTCTTCAAGCAATTGCATGTACAGGGGTCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTAATTTTCGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCTATACCTGATGGGGTTGATCTTGGAAGTGCCTGTGAGGCGGGTCAAGGATTTTTCTGCAACATCACTGATCTTCGATTGGAAAACAGCGGCATTGACGAACTCGACAAATCGCTTATTAATACGTTGTTTGAGGTTGTAACTAGTGAGAGTAGAGATTCCCCTTTCATTTTGTTCATGAAAGAAGCAGAAAAGTCAATAGTAGGAAATGGAGATCCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCCGATAATGTGGTGGTAATAGGTTCACACACTCACTCCGACAGTCGAAAGGAGAAGTCACATGCTGGGGGTTTGCTTTTTACAAAGTTTGGCAGCAACCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTCGGAAGATTACATGACAGGGGTAAAGAAGTCCCAAAACCAAACAAAACTTTGACTAAGCTATTTCCAAATAAAGTAACAATTCACATGCCACAGGATGAGGCACTTCTAGCATCATGGAAACAACAACTTGATCGAGATGTGGAGACTCTTAAAATCAAAGGAAATTTGCACCATTTGCGCACCGTTTTAAGCCGTAGTGGGATGGAATCTGACGGACTCGAGAGCTTGTGTGTCAAGGACCTGACACTTACAAATGAAAATTCAGAGAAGATTCTTGGTTGGGCTTTAAGCCACCATTTGATGCAGAATCCTGAAGCTGACGCAGATGCAAAGCTTGTGTTGTCTAGTGAGAGCATCCAGTATGGAATTGGGATCTTTCAGGCTATCCAGAATGAGTCGAAGAGCCTAAAGAAGTCTCTTAAGGACGTTGTAACAGAAAACGAGTTTGAAAAGAGGCTTCTGGGTGATGTTATTCCACCTAACGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCCGAGCTTTTCTGCAAGGGGCAGTTAACCAAGCCATGCAAGGGTATTCTATTATTTGGTCCCCCAGGAACAGGTAAGACAATGCTTGCCAAGGCAGTTGCTACCGACGCCGGTGCAAACTTCATCAATATTTCGATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATACGTCAAAGCTGTTTTCTCCCTGGCAAGTAAAATAGCTCCCAGTGTGATATTCGTGGATGAAGTTGATAGCATGTTGGGGCGGAGGGAAAATCCAGGGGAGCACGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAACGAGTTATTGTGCTTGCAGCCACCAATAGACCTTATGACCTTGATGAGGCTGTCATACGAAGGCTACCTCGGAGATTAATGGTAAATTTACCAGATGCTCCAAATAGAGCAAAGATATTGAAAGTTATACTCGCAAAAGAGGACTTATCTTCTGATGTTGATCTGGGTGCAATTGCAAATATGACTGACGGTTACTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACACCGTCCTATTAAAGAGATATTGGAAAAGGAAAAAAAGGAACTTGCTGCTGCTGTAGCAGAAGGTAGACCTGCACCAGCACTGCGTGGAAGTGATGATATCCGATCTTTAAACATGGAAGATTTTAAACATGCTCACCAACAGGTATGTGCAAGTGTTTCCTCTGAATCAGTAAATATGACAGAGCTTGTACAGTGGAATGAACTCTATGGTGAAGGTGGTTCAAGAGTTAAGAAAGCACTAAGCTATTTTATGTGA 3726 0.4372 MVSTRRNSGGSFPNNNNNSGKRPSSSSDDKPPSSPSSKRQKPDNGAASSEKPPENSNPEPSADPGKCAQPDAQIDEPVAAADDDKADTTPPIADASTPTLVADKPRASFSSWSLYQKQNPNLESSAPWCRLLSQSAQHPNVSICIPNFTIGSSRNCNFHLKDHTISGNLCKIKHTQREGSDVAVLESTGSKGSVIVNGTLVKKSTCCTLNSGDEVVFGLHGNHSYIFQQVNTEVAVKGAEVQSGIGKFMQLERRSGDPSAVAGASILASLSNLRQDLTRWKSPSQTASKPHQGADVSIHTVLPDGTEIELDGLGNSTPSMGTDKAADAEASNKNTPMDCDPEDAGAEPGNVKYSGVNDLLRPFFRILAGSTTCKLKLSKSICKQVLEERNGAEDTQAASTSGTSVRCAVFKEDAHAAILDGKEQEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAKYTADLPTVNPRILLSGPAGSEIYSEMLVKALAKYFGAKLLIFDSQLLLGGLSSKEAELLKDGFNAEKSCSCPKQSPTATDMAKSTDPPASETDTPSSSNVPTPLGLESQAKLETDSVPSTSGTAKNCLFKLGDRVKYSSSSACLYQTSSSSNCMYRGPSNGSRGKVVLIFDDNPLSKIGVRFDKPIPDGVDLGSACEAGQGFFCNITDLRLENSGIDELDKSLINTLFEVVTSESRDSPFILFMKEAEKSIVGNGDPYSFKSKLEKLPDNVVVIGSHTHSDSRKEKSHAGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLSRSGMESDGLESLCVKDLTLTNENSEKILGWALSHHLMQNPEADADAKLVLSSESIQYGIGIFQAIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATDAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVIVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLGAIANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKELAAAVAEGRPAPALRGSDDIRSLNMEDFKHAHQQVCASVSSESVNMTELVQWNELYGEGGSRVKKALSYFM* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2357 1241 Gene3D - 1109 1203 - -
Mtr3g2357 1241 MobiDBLite consensus disorder prediction 1 101 - -
Mtr3g2357 1241 ProSitePatterns AAA-protein family signature. 1080 1099 IPR003960 GO:0005524|GO:0016887
Mtr3g2357 1241 MobiDBLite consensus disorder prediction 526 562 - -
Mtr3g2357 1241 MobiDBLite consensus disorder prediction 307 348 - -
Mtr3g2357 1241 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 384 1241 - -
Mtr3g2357 1241 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 85 359 - -
Mtr3g2357 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 936 1216 IPR027417 -
Mtr3g2357 1241 CDD FHA 128 228 IPR000253 GO:0005515
Mtr3g2357 1241 Pfam FHA domain 149 218 IPR000253 GO:0005515
Mtr3g2357 1241 MobiDBLite consensus disorder prediction 1 56 - -
Mtr3g2357 1241 Pfam AAA+ lid domain 1130 1165 IPR041569 -
Mtr3g2357 1241 Gene3D - 935 1216 IPR027417 -
Mtr3g2357 1241 CDD AAA 975 1108 - -
Mtr3g2357 1241 Pfam ATPase family associated with various cellular activities (AAA) 977 1106 IPR003959 GO:0005524|GO:0016887
Mtr3g2357 1241 Gene3D - 127 236 - -
Mtr3g2357 1241 SUPERFAMILY SMAD/FHA domain 112 228 IPR008984 GO:0005515
Mtr3g2357 1241 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 384 1241 - -
Mtr3g2357 1241 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 85 359 - -
Mtr3g2357 1241 SMART AAA_5 973 1110 IPR003593 -
Mtr3g2357 1241 MobiDBLite consensus disorder prediction 525 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2357 Mtr-Chr3 37403474 37417170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2357 936 1184 Calmodulin-binding Proteins AT3G56690 40.234 1.42e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2357 - - gmx:100780098 1969.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2357 3 37403474 37417170 Mtr3g2357 3 37403474 37417170 ECH