Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2339 ATGGATAGGCTATGCTGTTTTAAATCTTCATACTCTCAGCTTGTAGCATCGCGTCCTTCATCCAGCACTGGTAAGGGGAAGAATTATGAAGGTTCAATAAAGTATGGTTTTAGCCTGGTAAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGTTACAAGATAAAGAATTGGGTTTGTTTGCTATCTATGATGGTCACCTAGGAGACCGTGTCCCCGCCTACTTACAGAAACATTTGTTTAGCAACATTTTAAGGGAGGAGGGATTTTGGGATGACCCTACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAGGCTATTCTATCACATAGTTCTGATTTAGGGCATGGTGGATCAACAGCTGTAACTGCGATATTAATCGATGGAAGAAGACTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGGCAAGCAGTACAAATGACTATCGATCACGAACCTAACACAGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTCTCCAACTTGCCAGGTGATGTGCCAAGAGTAAATGGACAATTGGCTGTTTCTCGCGCATTTGGAGACAGGAGTCTCAAGTCACATTTGAGATCGGACCCGGACGTACAAACAACTGATATAGATGTTGATATTGAAATTCTAATCCTTGCAAGTGATGGAATTTGGAAGGTAATGGCTAATCAGGAAGCAGTGGATATTGCTAAAAGAATGAAAGATCCACATAAAGCAGCAAAACAACTTGCAGCTGAAGCAATAAAAAGAAACAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGATGA 849 0.4075 MDRLCCFKSSYSQLVASRPSSSTGKGKNYEGSIKYGFSLVKGRANHPMEDYHVAKFVQLQDKELGLFAIYDGHLGDRVPAYLQKHLFSNILREEGFWDDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILIDGRRLWIANVGDSRAVLSRKGQAVQMTIDHEPNTERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDRSLKSHLRSDPDVQTTDIDVDIEILILASDGIWKVMANQEAVDIAKRMKDPHKAAKQLAAEAIKRNSKDDISCVVVKFR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2339 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Mtr3g2339 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Mtr3g2339 282 SMART PP2C_4 30 279 IPR001932 -
Mtr3g2339 282 Gene3D - 30 282 IPR036457 -
Mtr3g2339 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Mtr3g2339 282 CDD PP2Cc 33 281 IPR001932 -
Mtr3g2339 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Mtr3g2339 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Mtr3g2339 282 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2339 Mtr-Chr3 37203908 37206573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2339 1 282 PP2C-type Phosphatase Gene Family AT1G22280 70.486 4.92e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2339 K17506 - gmx:100797292 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2339 3 37203908 37206573 Mtr3g2339 3 37203908 37206573 ECH