Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2325 ATGGAAGGAAAAATCAATAAGAACAAGGTGGAAAAAGTTGTATTAGGCTGCACTTTCATGGGAAAAATCTTCAAATTCAAGACCAACAAACTCAGAAATTCATCATCTGTTCATTCACTACCTATCAAGACAGTTAACAATACACAACAAAAAGAATCAAAAGGGTCGCCAAATCATGAGTCAAAAGTTCCAACTGAGACTCAAGCAAGAAAAAGCATCACTTTTTCTCACACACCTACAGATTCTGCAAGAAGCTCAATTCAACAGAAAGAGCCTAATGGTAATTCCTTAGGACTTGCAAGAATAAGTACTAGTAGTACTACTACTACTATTCGTCCGCGAGACAGTGAAACCAAGTCCCCTAGCAAAGATTTGAGCACACCAAAACTCACTGGGAATTTGCTTATGAATAGTAGCTATAGCAGCCCAAGAACAAGTGTTACAAGGAATAATAAAGAGTTGAATTCTGTGTCATGTTCTGTGAATAACAGTGTAATGGGGAATATAATGAGGAAAAGTGGTGATGGTGTGTCACAATTTCGAAGTCCTAGAAGCAACAGAATACTAGACCCTGAGGTGTTGAAATCAATGGGAAATGAAGCATACAAACAAGGAAGATTTTCTGAGGCTTTGGCTTTGTATGAACGAGCTATTGCTATTGATTCCAATAAGGCAACTTATCATTGTAACAAGAGTGCTGCTTTGATTGGTTTGGGAAGGTTTCAGCATGCAATTGTTGAGTGTGAGGAAGCTATTAGGATTGACCCTTCTTATCCTAGAGCTCATAGCCGTTTGGCGACAATATACTTCAGGTTGGGAGAAGCAGAAAAGGCATTGAACTGCAATAAAGAAACTCCGTACTTTGATTCGGAACTTGATTTCCAAGCTCAGGCTCTTCAAGTTCACTTTAACAAATGCAGTGAGGCCAGGAAAGTCAAGGATTGGAAAGTTATATTGAAGGAAACACAGTCTGCAATATCCTTAGGTGTGGATTCAGCTCCAAAGGTCTATGCTTTACAAACTGAAGCCTTGTTGAAGCTCCTAAGACAGCAAGAAGCATATACAATTTACGAGAAAATGCCAAAATTTGACCTTGATTGGTGTAACAAATTATTTGGACCAGTTTCTAGTGCTTACCTTCTGATGATAGGAGCACAAGTTTACTTGGCAGCCGGCAGGTTTGAGGATGCCGTGACAGCATCACAGAAAGCGGCTAAACTTGATCCAAGCAACACCGATGTGAATGTAGTGGTAAGAAGGGCAAGAGCCGCGACATCTGCCAGATTGAGTGGTAACTTGCTCTTCAAGGCATCAAAGTTCACGGAAGCATGTGCGGTATACAATGAAGGACTAGAGTATGATCCATTCAACTCAGTTCTGTTATGTAACAGAGCAGCTTGTCGTTCTAAGCTCGGCCAATTTGAGAAAGCAATTGAAGACTGCAATGTAGCTCTTACAGTTCAGCCTAATTATAGCAAGGCAATGTTGCGGCGAGCTGATTGCAATGCTAAGTTGGAAAGATGGGAAGCTGCAATTCAAGACTATGAAATGTTGATAAGAGAAAAGCCAGGCGATGAGGAGGTTGCTAGGGCTTTGTTTGAAATCCAACTAAAACTCAAAATGCTACGCGGCGAAGATGTTAAGGACTTGAAATTTGGTTCAAATTTGGTTTGCATCTCAAGTAATGATAGGTTTAGACATTATGTAACTTCACCTGGTATGTCTGTGGTGCTCTTTTGCAACAAGGCAACTCATAAGCAAGTAGTATTGGTGTTGGAGCAAACTTGCAAGAGATTTCCATCAGTTAATTTCCTTAAGGTGGAGATTGAGGACCACCCTTACTTGGTAAAATCAGAAAGTGTGAACTCTGTCCCAGCTTTCAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCTGGCAAAAACCATGAAATGTTAGAAAGATCAGTTAAATTATATAGCAGCTGA 1971 0.3998 MEGKINKNKVEKVVLGCTFMGKIFKFKTNKLRNSSSVHSLPIKTVNNTQQKESKGSPNHESKVPTETQARKSITFSHTPTDSARSSIQQKEPNGNSLGLARISTSSTTTTIRPRDSETKSPSKDLSTPKLTGNLLMNSSYSSPRTSVTRNNKELNSVSCSVNNSVMGNIMRKSGDGVSQFRSPRSNRILDPEVLKSMGNEAYKQGRFSEALALYERAIAIDSNKATYHCNKSAALIGLGRFQHAIVECEEAIRIDPSYPRAHSRLATIYFRLGEAEKALNCNKETPYFDSELDFQAQALQVHFNKCSEARKVKDWKVILKETQSAISLGVDSAPKVYALQTEALLKLLRQQEAYTIYEKMPKFDLDWCNKLFGPVSSAYLLMIGAQVYLAAGRFEDAVTASQKAAKLDPSNTDVNVVVRRARAATSARLSGNLLFKASKFTEACAVYNEGLEYDPFNSVLLCNRAACRSKLGQFEKAIEDCNVALTVQPNYSKAMLRRADCNAKLERWEAAIQDYEMLIREKPGDEEVARALFEIQLKLKMLRGEDVKDLKFGSNLVCISSNDRFRHYVTSPGMSVVLFCNKATHKQVVLVLEQTCKRFPSVNFLKVEIEDHPYLVKSESVNSVPAFKIYKNGSRVKEIPGKNHEMLERSVKLYSS* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2325 656 Gene3D Glutaredoxin 551 655 - -
Mtr3g2325 656 ProSiteProfiles TPR repeat profile. 378 411 IPR019734 GO:0005515
Mtr3g2325 656 MobiDBLite consensus disorder prediction 34 115 - -
Mtr3g2325 656 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 655 - -
Mtr3g2325 656 Pfam TPR repeat 198 233 - -
Mtr3g2325 656 CDD TRX_family 565 652 - -
Mtr3g2325 656 ProSiteProfiles TPR repeat profile. 191 224 IPR019734 GO:0005515
Mtr3g2325 656 Pfam Tetratricopeptide repeat 379 411 IPR019734 GO:0005515
Mtr3g2325 656 SUPERFAMILY TPR-like 428 540 IPR011990 GO:0005515
Mtr3g2325 656 MobiDBLite consensus disorder prediction 34 150 - -
Mtr3g2325 656 Pfam Thioredoxin 586 649 IPR013766 -
Mtr3g2325 656 Pfam Tetratricopeptide repeat 494 523 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 492 525 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 378 411 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 225 258 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 458 491 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 424 457 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 191 224 IPR019734 GO:0005515
Mtr3g2325 656 SMART tpr_5 259 292 IPR019734 GO:0005515
Mtr3g2325 656 Coils Coil 498 518 - -
Mtr3g2325 656 Pfam Tetratricopeptide repeat 447 479 - -
Mtr3g2325 656 MobiDBLite consensus disorder prediction 123 150 - -
Mtr3g2325 656 Gene3D Tetratricopeptide repeat domain 190 543 IPR011990 GO:0005515
Mtr3g2325 656 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 655 IPR044534 -
Mtr3g2325 656 SUPERFAMILY TPR-like 190 414 IPR011990 GO:0005515
Mtr3g2325 656 SUPERFAMILY Thioredoxin-like 540 649 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2325 Mtr-Chr3 37022185 37026097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2325 420 557 Calmodulin-binding Proteins AT5G48570 28.105 1.74e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2325 K09527 - gmx:100814381 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2144 5 27758472 27762659 Mtr3g2325 3 37022185 37026097 PCT