Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2323 ATGACGAAACAAAATAATGCAGTAACACCAGAATTTAAGTCATGTATTAACAATCTTATCTCTACTGTGGTGTTACCAAGTGCAGCTACCGTGCCAGAATCTATGGCTTTGATTAATGGGTTTTTGGGTTTTTCTCGTAAGAATTTTACTAAGAGATTAGAAGAAAGTAAAGTTAATGCTTGGATTGATTCAATGAGAGCTGCTTCTCCAACTCGTGTCAAATCTTCAGAAAATCAGGAAAAATGTTCTTGGATTCTTTATCACCCTTCAGCACTGAAATTGTTTGATCAAATATTGTATAGTGCAAAAAGAAAACAGATAGTGTTTTTTCTTGACTATGATGGTACTCTCTCACCTATTGTTGCCGATCCAGAAAAAGCTTTCATGACTAGAAAGATGAGAGCAACACTTAAAGATATAGCAAGAAATTTCCCAACAGCCATCGTGACAGGAAGGTGCAGAGAGAAGGTGTTTAACTTTGTAAAATTAGCTGAGCTGTACTATGCAGCAAGCCATGGCATGGACATTATGGGACCAACAAAAAACCGAAGTGCTGAGAAAAGTAATGTTAACAAAGCTGTGTTGTTCCAACCTGCAAGTCAATACCTACCAATGATAGACGAGGTGTACAAAATATTGTTAGAAAAAACAAAGTCTGTCTCAGGAGCTAAGGTAGAGAACAACAAATTTTGTTTGTCCGTGCACTTTCGTTGTGTTGATGAAAAGAGTTGGGCTCCTTTGGCTGAGAAAGTTAGATTGGTGCTTAATGAATACCCAAAACTTAAGCTAACACAAGGAAGAAAAGTGCTTGAGATTCGTCCCACTATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTGGAATCGTTAGGATACAAGAACTCAAATGATGTATTCCCAATCTATATCGGGGATGATCGAACCGATGAGGATGCTTTCAAGGTTTTGCGTAGAAGGGGTCAAGGGGTTGGTATTCTTGTTTCTAGTGTGCCAAAAGAAACAGATGCTTCCTACACACTACAAGACCCATCAGAGGTTGAGCATTTTTTGCGGCGATTGGTGGAGTGGAAAAGATCAAGTATTGTGAACCCCACAAGTGCATAG 1107 0.3893 MTKQNNAVTPEFKSCINNLISTVVLPSAATVPESMALINGFLGFSRKNFTKRLEESKVNAWIDSMRAASPTRVKSSENQEKCSWILYHPSALKLFDQILYSAKRKQIVFFLDYDGTLSPIVADPEKAFMTRKMRATLKDIARNFPTAIVTGRCREKVFNFVKLAELYYAASHGMDIMGPTKNRSAEKSNVNKAVLFQPASQYLPMIDEVYKILLEKTKSVSGAKVENNKFCLSVHFRCVDEKSWAPLAEKVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYKNSNDVFPIYIGDDRTDEDAFKVLRRRGQGVGILVSSVPKETDASYTLQDPSEVEHFLRRLVEWKRSSIVNPTSA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2323 368 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 109 320 IPR006379 -
Mtr3g2323 368 Gene3D - 215 364 IPR023214 -
Mtr3g2323 368 Gene3D - 107 210 IPR023214 -
Mtr3g2323 368 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 361 - -
Mtr3g2323 368 CDD HAD_TPP 108 347 - -
Mtr3g2323 368 TIGRFAM T6PP: trehalose-phosphatase 105 355 IPR003337 GO:0003824|GO:0005992
Mtr3g2323 368 SUPERFAMILY HAD-like 108 357 IPR036412 -
Mtr3g2323 368 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 8 361 IPR044651 GO:0004805|GO:0005992
Mtr3g2323 368 Pfam Trehalose-phosphatase 110 345 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2323 Mtr-Chr3 36986511 36988937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2323 103 354 Trehalose Biosynthesis Gene Families AT1G70290 27.239 8.19e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2323 K01087 - gmx:100788641 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2143 5 27694053 27696788 Mtr3g2323 3 36986511 36988937 PCT