Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2307 ATGTCTCCAATGGATTCTCCAACTGATAAACATATAGACACAAACAAGATGGATGAAAGAAGTTTGTCAGCTTCACATGATCAACAACCATATGCTTACAAAGTTGCAATTCCTCCAAAACAGAACTTATTCAAGGAATTCCAATATACTGTAAAAGAAACATTCTTTGCTGATGATCCTCTAAGATCTTTCAAAGACCAAAGTACATCAAAAAAGTTGATACTTGGTATTGAGTTCATATTCCCTATACTTAACTGGGGGAGAAGTTACAATCTTAAAAAATTTAGGGGAGATATAATTGCTGGTCTCACTATTGCAAGTCTTTGCATACCTCAGGATATTGGATACTCTAAGCTTGCACATTTGGCACCACAGTATGGACTATATTCTAGCTTTGTTCCACCACTTATTTATGCTTTCATGGGTAGTTCTCGCGATATAGCAATAGGACCAGTGGCAGTGGTATCTCTCTTGTTGGGGACATTGCTTAGTAATGAGATTGATCCTGTTACGCATGCAGAAGAATATCGACGTCTGGCTTTTACAGCCACTTTTTTTGCTGGGATTACACAAGCAACTCTTGGGATTTTCAGATTAGGGTTCTTGATTGACTTCCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCTATCACAATTGCCCTTCAACAGCTAAAGGGTTTCCTTGGCATTAAAACTAAAATGTTCACAACGAAAACTGATATTATCTCCGTGTTGAAGGCAGTATTCTCATCAGCCAAACATGGATGGAACTGGGAAACTATATTAATCGGAGCTAGCTTTTTGAGTTTCCTTCTGGTCGCCAAATTTATTGGAAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCAATTGCCCCATTGATATCAGTTGTGTTGTCCACTTTTTTTGTATTCATAACACGCGCAGATAAGCAAGGAGTAGAAATTGTAAATCACATAGAGAAAGGGATCAATCCTTCATCTGTTCATGAAATTTATTTTAGCGGCGATTACCTTGGGAAAGGTTTTAAAATTGGCGTCATGGCAGGCATGATTGCACTGACGGAAGCCATAGCTATTGGAAGAACATTTGCATCTATGAAGGATTATCAGTTAGATGGAAACAGAGAAATGGTAGCATTAGGAACAATGAATGTCGTTGGTTCTATGACTTCATGTTATGTGGCAACTGGTTCTTTCTCTCGGTCGGCGGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCTAATATTGTGATGTCAATAGTAGTTTTTTTAACACTACAATTCATCACTCCTCTTTTTAAGTACACTCCAAATGCCATTCTCGCCGCCATCATCATTTCTGCCGTCATCAGTCTTGTGGACTATCAGGCAGCAATTTTGATCTGGAAGACTGATAAATTCGATTTTGTTGCCTGCATGGGAGCATTCTTTGGGGTTGTTTTCGTCTCGGTTGAGATAGGACTTCTAATTGCTGTTTCAATATCTTTTGCAAAGATCCTATTACAAGTGACAAGGCCAAGAACTGCTATTTTGGGGAAGATTCCTGGGACATCTGTCTATAGAAACATCCAACAATACACTGAAGCTAGTAAGGTTCCAGGTGTAATGATTGTAAGAGTTGATTCTGCTATATATTTTTCCAACTCCAACTATGTTAAAGAAAGAATATTAAGATGGCTAACGGATGAAGAAGCAGTGAAAGGAGACTACCATACAAGAATTCAGTTTTTGATAGTTGAAATGTCACCGGTTACTGACATCGATACGAGTGGCATCCATGCCTTTGAAGAGTTGCATAGAAGTCTTGAAAAAAGAGGTGTTCAGCTTGTTCTGGCAAATCCTGGTTCAGCAGTGACAGACAAACTTTACACATCAAATTTTGCTAACATAATTGGTCAGGACAACATTTTCCTCACTGTTGCAGCAGCTGTTGCAAATTGTGCTCCAAAGCTAGATGTGAACCCATGA 1980 0.3924 MSPMDSPTDKHIDTNKMDERSLSASHDQQPYAYKVAIPPKQNLFKEFQYTVKETFFADDPLRSFKDQSTSKKLILGIEFIFPILNWGRSYNLKKFRGDIIAGLTIASLCIPQDIGYSKLAHLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAEEYRRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTKMFTTKTDIISVLKAVFSSAKHGWNWETILIGASFLSFLLVAKFIGKKNKKFFWVPAIAPLISVVLSTFFVFITRADKQGVEIVNHIEKGINPSSVHEIYFSGDYLGKGFKIGVMAGMIALTEAIAIGRTFASMKDYQLDGNREMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILAAIIISAVISLVDYQAAILIWKTDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPGTSVYRNIQQYTEASKVPGVMIVRVDSAIYFSNSNYVKERILRWLTDEEAVKGDYHTRIQFLIVEMSPVTDIDTSGIHAFEELHRSLEKRGVQLVLANPGSAVTDKLYTSNFANIIGQDNIFLTVAAAVANCAPKLDVNP* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2307 659 Pfam STAS domain 530 647 IPR002645 -
Mtr3g2307 659 Pfam Sulfate permease family 95 477 IPR011547 GO:0016021
Mtr3g2307 659 SUPERFAMILY SpoIIaa-like 533 651 IPR036513 -
Mtr3g2307 659 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Mtr3g2307 659 Gene3D STAS domain 509 654 IPR036513 -
Mtr3g2307 659 PANTHER SULFATE TRANSPORTER 15 659 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr3g2307 659 MobiDBLite consensus disorder prediction 9 23 - -
Mtr3g2307 659 ProSiteProfiles STAS domain profile. 529 651 IPR002645 -
Mtr3g2307 659 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 15 659 - -
Mtr3g2307 659 MobiDBLite consensus disorder prediction 1 27 - -
Mtr3g2307 659 CDD STAS_SulP_like_sulfate_transporter 530 644 - -
Mtr3g2307 659 TIGRFAM sulP: sulfate permease 82 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2307 Mtr-Chr3 36788658 36795051 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2307 1 655 Inorganic Solute Cotransporters AT1G22150 75.762 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2307 K17470 - gmx:100804208 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2307 3 36788658 36795051 Mtr3g2307 3 36788658 36795051 ECH
Mtr5g2114 5 27270069 27275526 Mtr3g2307 3 36788658 36795051 PCT