Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2306 ATGAGTTCATTACCTTCTGATGCTTTCAATATGAGAGTCACAGAAGATGGAAATCTTCATCTTGAAGATACTCATCAAATAGATAGGACACAGTGGATGCTAAATTCTCCAAATCCACCTCCTCTATGGAAAAAACTCATTACTCCACTTAAGAATAACAAGCTCTTTTCTTCATCCAAGAAAAGAACTTGCCATGAACATGTTGTTTCTTTCTTTAGTGGATTATTTCCAATACTTAGCTTGTTCAAAAACTATGATGCTTTCAAGTTTAAAGATGATTTCCTAGCAGGTTTAACTCTTGCTAGCCTAAGCATACCTCAGAGTATTGGTTATGCTAATTTAGCAAAACTTGATCCTCAATATGGCTTATACACAAGTGTGGTTCCTCCTCTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATTGCAATTGGACCTGTAGCCGTAGTGTCACTGCTGCTATCTTCCTTATGTCACAAAGTGGTTGATCCAGATTTAAATCATGATGGTTACAGAAATTTTGTCTTTACTGTAACATTATTTGCTGGAATTTTTCAAGTTGCATTTGGAGTTTTCAGGTTGGGATTTCTTGTGGATTTTTTGTCACATGCTGCACTTGTAGGATTCATGGCAGGTGCAGCCATCATGATTGGTCTGCAGCAGCTTAAGGGGTTGCTTGGGATTAGTAACTTCACCAACAAATCTGATGTTGTTTCTGTTTTGGAATCTGTTTATAAGTCACTCCATCATCAAATTCCATCCGGAGAATGGTACCCTCTGAATTTTGTCATTGGAAGTTCATTTCTGATTTTCCTTTTGTTTGCAAGATTTATGGGAAAAAGAAACAAAAAGCTTTTCTGGTTGCCAGCTATTGCTCCTCTAGTGTCAGTTATATTATCAACTTTTATTGTGTATATATCCAAAGCAGATAAAAATGGGGTTAATATAGTAAAACATGTCAAAAGAGGCATTAATCCAAGCTCAATTCACCAATTACAACTCAATGGTGAACATGTTGGAGAAGCAGCTAAAATTGGATTGATTTCTGCTGTTATTGCTCTCACTGAAGCAATGGCTGTTGGTAGATCTTTTGCTTCAATTAAAGGATACCATCTTGATGGGAACAAAGAAATGTTAGCAATGGGTTGTGGTAACATTGCAGGATCTTTTACTTCATGCTATGTTGCAACTGGTTCATTTTCAAGAACAGCAGTAAATTTCAGTGCAAGATGTCAATCATCAGTATCAAATATTGTGATGGCTATAACAGTGATTCTGTGTTTGGAATTGTTTACAAGGCTGTTATATTACACACCTGTGGCTATACTTGCTTCTATAATCCTCTCTGCACTTCCAGGATTAATCGACATAAGAGAAGCTTGCTATATATGGAAAGTTGACAAATTTGACTTCCTTGCTTGCATTGGTGCTTTCTTTGGTGTCTTGTTTGTATCAGTAGAAACTGGTCTTCTTGTTGCTGTATCAATCTCGTTTGCAAAGATAGTAATACAATCAATTAGACCTGGGATAGAAGTTCTAGGTAGAATTCCAACAACACAAGCCTTCTGTGATGTTAGTCAATATCCCATGGCTACAAGCACTCCTGGAATCTTGGTCATTCGTATAAGCTCTGGCTCACTCTGCTTTGCAAATGCCAATGTTGTAAGAGAAAGAATACTCAAGTGGGTTACTGAAGAAGATGACCTTAAAGAAAGTCAAACTACTAAGGGGAGAGTCCAAGCTGTAATATTTGACATGACTAATTTGATGAATGTTGATACTTCTGGAATTATAGTACTGGAGGAACTGCACAAGAGGTTACTCTCCCGTGGCATAAAATTTGCTATGGTGAATCCAAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCACACTTTGTGGATAAAATTGGGAAAGAATGGGTTTTCCTTACTGTTGCTGAAGCTGTGGAAGCATGCCTATCTTATAAATTTGCTGATCCATGA 1983 0.3737 MSSLPSDAFNMRVTEDGNLHLEDTHQIDRTQWMLNSPNPPPLWKKLITPLKNNKLFSSSKKRTCHEHVVSFFSGLFPILSLFKNYDAFKFKDDFLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLCHKVVDPDLNHDGYRNFVFTVTLFAGIFQVAFGVFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGISNFTNKSDVVSVLESVYKSLHHQIPSGEWYPLNFVIGSSFLIFLLFARFMGKRNKKLFWLPAIAPLVSVILSTFIVYISKADKNGVNIVKHVKRGINPSSIHQLQLNGEHVGEAAKIGLISAVIALTEAMAVGRSFASIKGYHLDGNKEMLAMGCGNIAGSFTSCYVATGSFSRTAVNFSARCQSSVSNIVMAITVILCLELFTRLLYYTPVAILASIILSALPGLIDIREACYIWKVDKFDFLACIGAFFGVLFVSVETGLLVAVSISFAKIVIQSIRPGIEVLGRIPTTQAFCDVSQYPMATSTPGILVIRISSGSLCFANANVVRERILKWVTEEDDLKESQTTKGRVQAVIFDMTNLMNVDTSGIIVLEELHKRLLSRGIKFAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVAEAVEACLSYKFADP* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2306 660 PANTHER SLC26A/SULP TRANSPORTER-RELATED 17 659 - -
Mtr3g2306 660 SUPERFAMILY SpoIIaa-like 532 652 IPR036513 -
Mtr3g2306 660 ProSiteProfiles STAS domain profile. 544 652 IPR002645 -
Mtr3g2306 660 CDD STAS_SulP_like_sulfate_transporter 528 645 - -
Mtr3g2306 660 Gene3D STAS domain 507 654 IPR036513 -
Mtr3g2306 660 PANTHER SULFATE TRANSPORTER 17 659 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr3g2306 660 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Mtr3g2306 660 TIGRFAM sulP: sulfate permease 77 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr3g2306 660 Pfam Sulfate permease family 90 475 IPR011547 GO:0016021
Mtr3g2306 660 Pfam STAS domain 528 648 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2306 Mtr-Chr3 36759818 36765048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2306 26 656 Inorganic Solute Cotransporters AT5G10180 61.224 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2306 K17469 - gmx:100805269 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2113 5 27255094 27260730 Mtr3g2306 3 36759818 36765048 PCT