Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2299 ATGGATATATACGAGCCATTCCAGCAAGTTAGCATGTGGGGTGACAGCTTTAAAGTTGAAGGTGGTCTTAATTCAATTGCTTCTCCAATGTTACTTGTGAACAGTAACACTACTAGCATGGAGAACAAGTCTGAATATATTCCACATGAACCAAGGGAGCATTCAGAAGCTGAACAAGAGATTACAAATAATAAGGTACTTAGACGCCTCGCTCAGAATCGAGAGGCTGCTAAGAAAAGCCGGGAACGCAAAAAGGCTTATGTTAAACAATTAGAATCAAGCAGATTAAAGCTCATGCAATTGGAGCTGGAGATTGGGAGAGCAAGAAAGCAGGGTATTTCCACAGGAAGTGCATTAGACACCAGTTTTATGGGATCATCTGAAACAATAAACCCAGGGATTGTCGCGTTTGAAATTGAATACGGAAATTGGGTTGACGAGAACCATAGGCGGAATGAAGAGCTCAGAAATGCATTTCAAACTAATGCGTCCGAAGTGCAGCTCCGTCTAGTTGTTCAGAGTGTCTTGAATCATTACTCGGATCTTTTCAGAATGAAAACGGATGCTGCAAAGGCTGATCCCCTCTATTTAATCTCCGGTGTGTGGAAACCATCCGTAGAGCGACTTTTCCTATGGATCGGAGGATCTCGGCCATCACAGCTTCTAAATCTCATTGTGCCACAACTTGAGCCTTTGTCTGATGAACAGATGTTTAGCATCAAAAAACTTCACCTGTCGTCTCAGCAAGCCGAAGATGCTCTTTCACAAGGACTAAATAAACTCCAGGAGAGTCTGGTCCAAGACATGGCATTTGTTCCATTAAATGCAGCAAATCATGGAATTCAGATGGCTATTGCTATAGACAAATTTGAGGGACTAGAAGGTTTTGTAATCCAGGCAGATCATCTCAGGCAGCAAACTCTGATACACATGTCCCGCATCCTGTCTACGCACCAAGCTGCTAGGGGCTTGATTGCTCTAGGGGAATACTTTCATCGCCTTCGTACTATTTGTTCTCTCTGGACTTCTCGTCCATTCGATTCCATGAGGTCACCTAGGATTACTCCTTAG 1071 0.4342 MDIYEPFQQVSMWGDSFKVEGGLNSIASPMLLVNSNTTSMENKSEYIPHEPREHSEAEQEITNNKVLRRLAQNREAAKKSRERKKAYVKQLESSRLKLMQLELEIGRARKQGISTGSALDTSFMGSSETINPGIVAFEIEYGNWVDENHRRNEELRNAFQTNASEVQLRLVVQSVLNHYSDLFRMKTDAAKADPLYLISGVWKPSVERLFLWIGGSRPSQLLNLIVPQLEPLSDEQMFSIKKLHLSSQQAEDALSQGLNKLQESLVQDMAFVPLNAANHGIQMAIAIDKFEGLEGFVIQADHLRQQTLIHMSRILSTHQAARGLIALGEYFHRLRTICSLWTSRPFDSMRSPRITP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2299 356 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Mtr3g2299 356 SUPERFAMILY Leucine zipper domain 66 95 IPR046347 GO:0003700|GO:0006355
Mtr3g2299 356 ProSiteProfiles DOG1 domain profile. 134 344 IPR025422 GO:0006351|GO:0043565
Mtr3g2299 356 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 348 - -
Mtr3g2299 356 Coils Coil 84 111 - -
Mtr3g2299 356 Gene3D - 64 117 - -
Mtr3g2299 356 Pfam bZIP transcription factor 65 93 IPR004827 GO:0003700|GO:0006355
Mtr3g2299 356 Pfam Seed dormancy control 153 226 IPR025422 GO:0006351|GO:0043565
Mtr3g2299 356 PANTHER TRANSCRIPTION FACTOR TGA9 1 348 - -
Mtr3g2299 356 SMART brlzneu 58 121 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2299 Mtr-Chr3 36663585 36666439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2299 1 345 Calmodulin-binding Proteins AT1G22070 51.099 5.37e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g2299 DOG1 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2299 K14431 - gmx:100775332 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2097 5 26904094 26907060 Mtr3g2299 3 36663585 36666439 PCT