Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2284 ATGCATCATATTTTCTACCATAACAACCTAACCAACATCATGGATTCAAAGAAGCTTCGAAGAAAACCTAAACTCGAGCGTCGTAATGCCCAAAAGTACACCGATTACGACGCTGGATCATCTTCATCTTCATTCGATGATTCATCCGGTTCACTTTACACTCGTTCTATGGAGTTATACGACCGAACTAGCTTCCGTATTGAAGGAGTAGAAGGTGAGTTTGATCGAATTTGTAGGAGTTTAGGACTTTCTGGACCCGAGGATTTTGCTATTCCTGCTGCTGCTTGGGAAGCCATGAAGATTCGATCCAATTCGGATGGTCTTCCCAGTTTGAAGCTTGATGAGCTTGATTTGAAGGAGAAGAAGGTGAATGATATGAGAGAATTAGAAAATAAAGGTGAATTGAACAAGAAATGTGAAGATAGGGATATGATTAGGGTTAGGGTTAGAGATGAGGTTGATGACAGTGTTGTTGTTGTTAGTAGTAGTGGTGGTATTAATGGAATTCGTCCACCGATGATTAAGCCGCCACCTGGGATGAGAGTTCCGGTTGTTGTTGATAACACGTGTTCCACTTGGGATCTTTTGAAGGATTTGGCTCCGGTTGGGGAAGGGGAAGAAGAGGGTTTTGACCGGGAAGTGGAGGAGAATGAAGGTGAGGAAGTTGGTAGAGAAGAGGGGGTGGTGGATAATGAGGCAAGGATTGATGCGATTGTTGCTGGTCTTATGGAATCAAGTTTGTTTAGTACTTCAAATGAAGATGATTCTTCTAGTACTGCTACAGAACCTAGATCGAACAATGTATCTCCAAACGGGAGAATTAATCGTTTCATTACGCCTGGAAGCTGGCAAAAGGGTGGCTTTTTGGGGGGTGGTTCATTTGGATCTGTCTATGAAGGAATTTCTGATGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCCTTGCTTGATCAAGGGGAACAGGGAAAACAAAGTGTCTATCAACTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGATAATATAGTTCAATACTATGGCACTGAAATGGATGAATCTAAGCTTCATATCTTTATTGAGCTTGTAACCAAAGGTTCTCTTAGAAGCCTCTATCAGAGGTACACTCTTCGAGATTCCCAAGTAGCTGCCTATACAAGACAGATTCTGCATGGTTTGAAGTACCTTCATGATCAAAACGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGCATGCAAGTGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGCAACCAAATTGAACGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCTGAGGTTGTGAGAGGAAAGAACAAAGGTTACGGGCTTCCAGCCGATATTTGGAGTCTGGGATGCACTGTTCTGGAGATGCTAACGGGCCAAATTCCGTACTCCAATTTGGAACCCATGCAGGCATTATTTAGAATAGGAAAAGGCCACTTTCCCAGTCTTCATCTCCTTACATTCATGGCAGAAGGGGTTAAACTTTGTCATCTTCAACTATGA 1557 0.422 MHHIFYHNNLTNIMDSKKLRRKPKLERRNAQKYTDYDAGSSSSSFDDSSGSLYTRSMELYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKIRSNSDGLPSLKLDELDLKEKKVNDMRELENKGELNKKCEDRDMIRVRVRDEVDDSVVVVSSSGGINGIRPPMIKPPPGMRVPVVVDNTCSTWDLLKDLAPVGEGEEEGFDREVEENEGEEVGREEGVVDNEARIDAIVAGLMESSLFSTSNEDDSSSTATEPRSNNVSPNGRINRFITPGSWQKGGFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGEQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLHIFIELVTKGSLRSLYQRYTLRDSQVAAYTRQILHGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVRGKNKGYGLPADIWSLGCTVLEMLTGQIPYSNLEPMQALFRIGKGHFPSLHLLTFMAEGVKLCHLQL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2284 518 MobiDBLite consensus disorder prediction 34 49 - -
Mtr3g2284 518 SMART serkin_6 283 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2284 518 Gene3D Transferase(Phosphotransferase) domain 1 282 513 - -
Mtr3g2284 518 Pfam Protein kinase domain 285 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2284 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Mtr3g2284 518 MobiDBLite consensus disorder prediction 19 49 - -
Mtr3g2284 518 MobiDBLite consensus disorder prediction 208 223 - -
Mtr3g2284 518 MobiDBLite consensus disorder prediction 248 274 - -
Mtr3g2284 518 ProSiteProfiles Protein kinase domain profile. 283 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2284 518 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 500 - -
Mtr3g2284 518 MobiDBLite consensus disorder prediction 204 225 - -
Mtr3g2284 518 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Mtr3g2284 518 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 60 500 - -
Mtr3g2284 518 SUPERFAMILY Protein kinase-like (PK-like) 272 501 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2284 Mtr-Chr3 36509953 36517644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2284 24 501 MAP Kinase Kinase Kinase AT4G08500 49.262 6.88e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr3g2284 Pkinase 1.5e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2284 K13414 - mtr:MTR_3g073250 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2284 3 36509953 36517644 Mtr3g2284 3 36509953 36517644 ECH
Mtr5g2080 5 26564200 26579796 Mtr3g2284 3 36509953 36517644 PCT