Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2281 ATGGCGGCTTCTGTAGATAATCGCATCTGGACAGGCCTTGAAAAAGGTCCAATCCACACTTTCAGGTCAACTTCAGATATCATGCATTTCAATATCCCCCAACCGCCATTGCCATTTCATAATTATCATTCCTCAAGCGAAGACGAAGACGACGAGGAGGAGATTCAAAACTTCAACAACAACCTCATTATGAAATCAAAGCAAACCACCAAAGAACTAGAACCATCAATCTTTGATCCACGCGACGCTGGGACCTCTGATCAATGGATCAAACGGAACACCTCAATGCTCCGTCTGACAGGAAAACACCCCTTCAACTCAGAGCCACCACTTCAAGAACTAGTAGAACATGGTTTTATTACACCTGTCCCACTCCACTATGTCCGTAACCACGGACCTGTCCCAAAAGCACAATGGGATAGTTGGACCATCGAAGTATCAGGTCTGGTCAAAAACCCGACCCAATTCACGATGGCCCAACTAATCGACGACTTCCCAAGTCATGAATTCCCTGTTACCCTTGTATGCGCGGGTAACCGGCGCAAGGAACAGAACATGATAAAACAAAGCATTGGTTTCAACTGGGGTGCAGCTGGTATCTCCACTTCAGTATGGCGTGGTGTACCACTGTGCACCGTACTCAAGAGTTGTGGCATCTTGAACCGTAACAGTGGGGCCCTCTATGTATGTTTTGAAGGTGCTGAGGAACTTCCAGGTGGTGGTGGATCCAAATATGGAACTAGTATCACAAGGGAGGTTGCATTGGATCCTTCCCGTGATATCATTCTTGCATATATGCAAAACGGTGACGTTTTAACACCAGATCATGGTTTTCCTGTTAGAATTATAATACCTGGTTTCATTGGAGGAAGAATGGTGAAATGGTTGAAGCGTATTATTGTTACTTCTAAACAATCTGATAATTATTATCACTACAATGATAATAGAGTACTTCCTTCACATGTTGATGCTGAGCTTGCCAATGCTGAAGCTTGGTGGTATAAGCCGGAGTATATTATAAACGAGCTGAATGTAAACTCTGTGATAACATCACCATGCCATGATGAAATACTGCCTATCAACTCATGCACTACTCAGATGCCTTATTTACTTAGAGGCTATGCATATTCAGGGGGTGGTAGAAAGGTGACACGTGTTGAAGTAACAATGGACGGTGGTGAAACATGGCAAGTATGCACATTGGACCATTCAGAAAAACCAAACAAGTACGGTAAGTACTGGTGCTGGTGCTTTTGGTCCTTGGAAGTTGAAGTGTTGGACCTTCTAGGAGCCAAGGATATTGCTGTACGAGCTTGGGATGAGTCCCTCAACACCCAACCTCAGAACCTCATTTGGAATCTCATGGGCATGATGAATAACTGCTGGTTCAAAGTGAAATCAAGTTTATGCAAAGCTAACAAGGGTGAAATTGGAATATTGTTTGAGCACCCAACTCAACCAGGGAACCAATCAGGTGGCTGGATGGCAAAAGAAAGACAGTTGGAAAAATCATCAGATTCTAACTCAATTCTCAAGAAGAGTCTCTCTTCACCCTTCATGATCACTAGCTCAAAAACCTACACCATTTCTGAAGTAGAAAAACATAATAACGCTGAATCAGCATGGATCATTGTCCATGGCCACGTCTATGACTGCACACGTTTCATCAAAGATCACCCTGGTGGTGCCGATAGCATCCTCATCAATGCTGGCACCGATTGTACAGAGGAGTTCGAAGCAATCCACTCTGACAAAGCCAAGAAAATAATTGAGCAGTATCGAATAGGTGAACTCATAACCACTGGCAGTTACTCCTCACCAGATATCTCAATGCATAACACTTCTGTTAGTGTTACCACAAATTTGGCCCCCATCAAGGAAATTACGCTTCCAGTTACACCTTTACGCAGTGTTAGTGTAGCTTTAAACCCGCGTGAGAAAACCTCATGCAAGCTTCTCTTTAAAAAGTCAATCTCTCACGACGTTAGGCTCTTTCGTTTTGCATTACCTTACGAGGGACAGCTCTTGGGATTACCTGTGGGGAAGCACATATTCTTATGCGCAACTATTGATGAGAAGTTATGCATGCGAGCTTACACACCAACAAGCAGCGTAGATGAAAAGGGACATTTTGATCTAGTGGTTAAGATTTACTTAAAAGGGGTGCATCCAAAGTTCCCTAATGGTGGCCTAATGTCTCAACACTTGGATTCAATGCCTATTGGCTCAACCTTGGATATAAAAGGTCCATTAGGACACATAGAGTATGCTGGTAGAGGAAACTTTATGGTTCACGGTAAGCACAAATTTGCAAAGAGACTAGCTATGTTGGCCGGTGGAAGTGGGATAACACCAATTTACCAAGTGGTTCAAGCAATTCTAAAAGACCCAGAAGATCTAACTGAATTGCATGTTGTGTATGCTAATCGAAGCGAGGATGATATATTGTTGAGGGAAGAGATGGATTCATGGGCTAAGAAGCATGAACAATTCAAAGTGTGGTATGTGGTACAAGAAAGTAAAAGAGAAGGGTGGGAATATAGTGTGGGGTTCATTACTGAAAGTATTTTGAAGCAACATGTTCCACAGGCTTCTCCAGATACATTGGCGTTGGTATGTGGCCCACCACCCATGGTTCAGTTTGCAGTAAAGCCCAATTTGGAGAAGTTGGGCTACGACGTTACCAACAACTTGCTACTCTTTTAA 2706 0.4327 MAASVDNRIWTGLEKGPIHTFRSTSDIMHFNIPQPPLPFHNYHSSSEDEDDEEEIQNFNNNLIMKSKQTTKELEPSIFDPRDAGTSDQWIKRNTSMLRLTGKHPFNSEPPLQELVEHGFITPVPLHYVRNHGPVPKAQWDSWTIEVSGLVKNPTQFTMAQLIDDFPSHEFPVTLVCAGNRRKEQNMIKQSIGFNWGAAGISTSVWRGVPLCTVLKSCGILNRNSGALYVCFEGAEELPGGGGSKYGTSITREVALDPSRDIILAYMQNGDVLTPDHGFPVRIIIPGFIGGRMVKWLKRIIVTSKQSDNYYHYNDNRVLPSHVDAELANAEAWWYKPEYIINELNVNSVITSPCHDEILPINSCTTQMPYLLRGYAYSGGGRKVTRVEVTMDGGETWQVCTLDHSEKPNKYGKYWCWCFWSLEVEVLDLLGAKDIAVRAWDESLNTQPQNLIWNLMGMMNNCWFKVKSSLCKANKGEIGILFEHPTQPGNQSGGWMAKERQLEKSSDSNSILKKSLSSPFMITSSKTYTISEVEKHNNAESAWIIVHGHVYDCTRFIKDHPGGADSILINAGTDCTEEFEAIHSDKAKKIIEQYRIGELITTGSYSSPDISMHNTSVSVTTNLAPIKEITLPVTPLRSVSVALNPREKTSCKLLFKKSISHDVRLFRFALPYEGQLLGLPVGKHIFLCATIDEKLCMRAYTPTSSVDEKGHFDLVVKIYLKGVHPKFPNGGLMSQHLDSMPIGSTLDIKGPLGHIEYAGRGNFMVHGKHKFAKRLAMLAGGSGITPIYQVVQAILKDPEDLTELHVVYANRSEDDILLREEMDSWAKKHEQFKVWYVVQESKREGWEYSVGFITESILKQHVPQASPDTLALVCGPPPMVQFAVKPNLEKLGYDVTNNLLLF* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2281 901 SUPERFAMILY E set domains 342 466 IPR014756 -
Mtr3g2281 901 PIRSF Nitr_rd_NADH 17 900 IPR012137 GO:0006809|GO:0042128|GO:0050464
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 97 111 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 119 135 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 172 183 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 183 195 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 198 213 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 256 272 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 273 286 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 289 302 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 340 352 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 371 385 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 385 397 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 412 422 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 437 449 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Eukaryotic molybdopterin domain signature 450 463 IPR008335 GO:0016491
Mtr3g2281 901 PRINTS Cytochrome B5 reductase signature 676 687 - -
Mtr3g2281 901 PRINTS Cytochrome B5 reductase signature 697 704 - -
Mtr3g2281 901 PRINTS Cytochrome B5 reductase signature 742 756 - -
Mtr3g2281 901 PRINTS Cytochrome B5 reductase signature 775 794 - -
Mtr3g2281 901 PRINTS Cytochrome B5 reductase signature 813 824 - -
Mtr3g2281 901 PRINTS Cytochrome B5 reductase signature 869 877 - -
Mtr3g2281 901 Pfam Oxidoreductase FAD-binding domain 650 756 IPR008333 -
Mtr3g2281 901 PANTHER NADH-CYTOCHROME B5 REDUCTASE 57 901 IPR001834 GO:0016491
Mtr3g2281 901 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 521 604 IPR036400 -
Mtr3g2281 901 CDD eukary_NR_Moco 82 466 - -
Mtr3g2281 901 Pfam Mo-co oxidoreductase dimerisation domain 338 466 IPR005066 GO:0016491|GO:0030151
Mtr3g2281 901 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 79 340 IPR036374 -
Mtr3g2281 901 SUPERFAMILY Riboflavin synthase domain-like 638 757 IPR017938 -
Mtr3g2281 901 Gene3D - 342 517 - -
Mtr3g2281 901 Gene3D Translation factors 637 751 - -
Mtr3g2281 901 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 524 599 IPR001199 -
Mtr3g2281 901 Gene3D - 81 332 IPR036374 -
Mtr3g2281 901 CDD cyt_b5_reduct_like 650 893 - -
Mtr3g2281 901 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 645 757 IPR017927 GO:0016491
Mtr3g2281 901 Pfam Cytochrome b5-like Heme/Steroid binding domain 529 598 IPR001199 -
Mtr3g2281 901 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 555 562 IPR018506 GO:0020037
Mtr3g2281 901 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 148 183 IPR022407 GO:0043546
Mtr3g2281 901 Gene3D - 752 901 IPR039261 -
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 558 568 IPR001709 GO:0016491
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 697 704 IPR001709 GO:0016491
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 775 794 IPR001709 GO:0016491
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 801 810 IPR001709 GO:0016491
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 813 824 IPR001709 GO:0016491
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 845 861 IPR001709 GO:0016491
Mtr3g2281 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 869 877 IPR001709 GO:0016491
Mtr3g2281 901 PANTHER NITRATE REDUCTASE 57 901 - -
Mtr3g2281 901 Gene3D - 521 601 IPR036400 -
Mtr3g2281 901 Pfam Oxidoreductase NAD-binding domain 776 883 IPR001433 GO:0016491
Mtr3g2281 901 PRINTS Cytochrome B5 signature 549 559 IPR001199 -
Mtr3g2281 901 PRINTS Cytochrome B5 signature 559 573 IPR001199 -
Mtr3g2281 901 PRINTS Cytochrome B5 signature 574 581 IPR001199 -
Mtr3g2281 901 PRINTS Cytochrome B5 signature 586 598 IPR001199 -
Mtr3g2281 901 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 744 895 IPR039261 -
Mtr3g2281 901 SMART Cyt_b5_2 527 599 IPR001199 -
Mtr3g2281 901 Pfam Oxidoreductase molybdopterin binding domain 131 310 IPR000572 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2281 Mtr-Chr3 36480275 36483845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2281 632 892 NADPH P450 reductases AT5G17770 39.394 2.03e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2281 K10534 - gmx:732634 1450.65