Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2279 ATGTCTACTTCCATTGAAAATCGTCGACCCTACTACAATGGCCTTGAATATAACGTCGTTGAACCCTTTAAAACAATGAGCCCAAAAACACCATTGCTATCGGATCCTTCAAACAAAGAAGAGGATGAAAAGTACTTGAGCATGGTGAAAAACATAATCCTAAAGGGAATATCTGAAGTAGAATCCTCAGTGTTAGACCCTCGTGATGTGGGTACCTTAGATCACTGGATTCAAAGAAACCCTTCCTTGATCCGTCTCACGGGTAAACACCCATTCAACTCCGAGCCACCACTCCAAAGCCTCATGCACCACGGCTTCATAACTCCCGTTCCACTCCACTATGTTCGTAATCACGGACATGTTCCCAAAGCATGTTGGGATGATTGGTCCATCGAAGTAACTGGTCTGGTAAAAAACCCAGCATGTTTCACGATGGACCAACTCATCAACGACTTCCCAAGCCGTGAATTTCCTGTCACGCTTGTTTGCTCCGCGAATCGTCGCAAGGAGCAGAATATGGTGAAGCAGACTATTGGATTTAACTGGGGTCCGTCTGCTACCTCCACTTCAGTATGGCGTGGTGTACCATTGAGAACCGTGCTCAAGCGTTGTGGAATATTTAACCGTAAAAGTGGGGCCCTCTATGTATGCTTTGAAGGTGCTGAGGAACTTCCAGGTGGTGGTGGTTCAAAATATGGAACTAGTATCCTCAGCGAGGTTGCATTGGATCGCACTAGCGATATCATTTTGGCGTATATGCAAAATGGTGAGGTTTTAGCTCCTGATCACGGTTTTCCTGTACGGGTTATCGTTCCTGGTTTCACTGCCGGAAGAATGGTGAAATGGTTGAAGCGAATCATTGTAACAACCAAAGAATCTGATAGCCATTATCATTACCATGATAACAGAGTACTTCCCTCGCAAGTTGATGCTGAGCTTGCCAATAAAGAAGCTTGGTTCTACAAACCTGAATATATTATCAACGAGTTGAACATAAACTCCGTGATAACAACGCCGTGTCACGGTGAGATATTGATCGTCAACTCAGACACTACTCTGATGCCTTATTTACTTAAAGGCTACGCATATTCCGGTGGTGGGAGAAAGGTGACAAGGGTGGAAGTGACGATGGACGGTGGTGAAACATGGCAAGTATGCAAATTGGAGCATCAAGAGAAACCAAGCAAATATGGAAAATATTGGTGTTGGTGCTTTTGGTCTTTAGAGGTTGAAGTGTTAGACTTTTTTGGAGCCAAAGAGATTGCAGTACGTGCATGGGATCTGGCTAATAACACGCAACCTGAAAATCTGAATTGGAATCTTATGGGCATGATGAACAATTGTTGGTTCAAAGTGAAAACAAACATGCACAAGCCTCAAAAGGGAGAGATTGGGATAATGTTTGAGCATCCAACCCAACCTGGAAACCAATCTGGTGGTTGGATGGTCAAAGAAAAAGAACAAGTATATCAAAAACCATCAAACTCTGACCCAGACCCTAAGAATAATATTGTCTCCTCATCATTGCACACAAACAATATTAGCTCAAAAACATACACCATGTTTGAAGTGAAAAAACATAATAACTCTGATTCAGCTTGGATCATCGTTAACGGTCACGTTTATGATTGCACTCACTACCTTAAAGACCACCCAGGAGGCGTCGATAGCATCCTGATCAACGCTGGCACTGATTGTACAGAGGAGTTTGAAGCCATACACTCTGATAAAGCAAAGAAAATGCTTGATGATTACTTAATCGGCGAGCTTTTAACCACAGACACCAAAGGCAATAGCGTTGAAGACGCCAACAAAGTTATTATTACACAAATGCAAAACAATGTGGCTTTAATTAACCCACGTGAGAGAATTTCATGTAAGCTTGTTTCAAAAAGCTCAATCTCCCACAATGTTAGGATTTTTCGATTTGCGTTACCTTATGAAGACCAACTATTGGGTTTACCAATTGGGAAACACTTATTTTTATGTGACACTATTGAAGAAAAGTTATGCATGAGAGCTTTCACTCCAACAAGCAGTGTAGATGAAAAGGGATATTTTGATCTATTGGTTAAGATTTATTTCAAAGGTGTTCATCCAAAATTCCCTAGTGGTGGCCTAATGTCTCAACACTTAGATTCATTGCCTATTGGTTCTATTTTGGATATAAAGGGTCCATTGGGACACATAGAATACATTGGTAGAGGAAATTTTCTTGTTCATGGTAAACACAAGTTTGCAAAGAGGTTAGCTATGTTGGCCGGAGGAACGGGGATAACACCGATTTACCAAGTGGTACAAGCGATTCTAAAAGATCTGAAGGATCTAACTGAAATATATGTTGTGTATGCTAATCGAAGCGAGGATGATATATTGTTGAGGGAAGAGATGGATTCTTGGTCTAAGAAGCATGAACGATTCAAAGTGTGGTATGTGGTACAAGAAAGTAAAAGAGAAGGGTGGAAATATAATGTGGGATTCATTACTGAAAGTATATTGAAGAAACATGTTCCAGAAGCATCAGAGGATACACTGGCATTGGCATGTGGACCACCTCCGATGATTCATGGGGTGAAGTTCGATTTGGAGAACTTAGGATATGATATCAAGAACAACTTGCTTGTGTTTTAG 2631 0.4139 MSTSIENRRPYYNGLEYNVVEPFKTMSPKTPLLSDPSNKEEDEKYLSMVKNIILKGISEVESSVLDPRDVGTLDHWIQRNPSLIRLTGKHPFNSEPPLQSLMHHGFITPVPLHYVRNHGHVPKACWDDWSIEVTGLVKNPACFTMDQLINDFPSREFPVTLVCSANRRKEQNMVKQTIGFNWGPSATSTSVWRGVPLRTVLKRCGIFNRKSGALYVCFEGAEELPGGGGSKYGTSILSEVALDRTSDIILAYMQNGEVLAPDHGFPVRVIVPGFTAGRMVKWLKRIIVTTKESDSHYHYHDNRVLPSQVDAELANKEAWFYKPEYIINELNINSVITTPCHGEILIVNSDTTLMPYLLKGYAYSGGGRKVTRVEVTMDGGETWQVCKLEHQEKPSKYGKYWCWCFWSLEVEVLDFFGAKEIAVRAWDLANNTQPENLNWNLMGMMNNCWFKVKTNMHKPQKGEIGIMFEHPTQPGNQSGGWMVKEKEQVYQKPSNSDPDPKNNIVSSSLHTNNISSKTYTMFEVKKHNNSDSAWIIVNGHVYDCTHYLKDHPGGVDSILINAGTDCTEEFEAIHSDKAKKMLDDYLIGELLTTDTKGNSVEDANKVIITQMQNNVALINPRERISCKLVSKSSISHNVRIFRFALPYEDQLLGLPIGKHLFLCDTIEEKLCMRAFTPTSSVDEKGYFDLLVKIYFKGVHPKFPSGGLMSQHLDSLPIGSILDIKGPLGHIEYIGRGNFLVHGKHKFAKRLAMLAGGTGITPIYQVVQAILKDLKDLTEIYVVYANRSEDDILLREEMDSWSKKHERFKVWYVVQESKREGWKYNVGFITESILKKHVPEASEDTLALACGPPPMIHGVKFDLENLGYDIKNNLLVF* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2279 876 Pfam Mo-co oxidoreductase dimerisation domain 325 455 IPR005066 GO:0016491|GO:0030151
Mtr3g2279 876 CDD eukary_NR_Moco 69 454 - -
Mtr3g2279 876 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 547 554 IPR018506 GO:0020037
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 84 98 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 106 122 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 159 170 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 170 182 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 185 200 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 243 259 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 260 273 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 276 289 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 327 339 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 358 372 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 372 384 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 399 409 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 424 436 IPR008335 GO:0016491
Mtr3g2279 876 PRINTS Eukaryotic molybdopterin domain signature 437 450 IPR008335 GO:0016491
Mtr3g2279 876 Pfam Oxidoreductase NAD-binding domain 752 858 IPR001433 GO:0016491
Mtr3g2279 876 Gene3D Translation factors 613 727 - -
Mtr3g2279 876 PANTHER NADH-CYTOCHROME B5 REDUCTASE 44 876 IPR001834 GO:0016491
Mtr3g2279 876 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 720 870 IPR039261 -
Mtr3g2279 876 CDD cyt_b5_reduct_like 626 876 - -
Mtr3g2279 876 Gene3D - 69 319 IPR036374 -
Mtr3g2279 876 SUPERFAMILY Riboflavin synthase domain-like 614 733 IPR017938 -
Mtr3g2279 876 Pfam Oxidoreductase molybdopterin binding domain 118 297 IPR000572 -
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 550 560 IPR001709 GO:0016491
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 673 680 IPR001709 GO:0016491
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 751 770 IPR001709 GO:0016491
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 777 786 IPR001709 GO:0016491
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 789 800 IPR001709 GO:0016491
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 821 837 IPR001709 GO:0016491
Mtr3g2279 876 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 845 853 IPR001709 GO:0016491
Mtr3g2279 876 Pfam Oxidoreductase FAD-binding domain 626 732 IPR008333 -
Mtr3g2279 876 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 135 170 IPR022407 GO:0043546
Mtr3g2279 876 PRINTS Cytochrome B5 signature 541 551 IPR001199 -
Mtr3g2279 876 PRINTS Cytochrome B5 signature 551 565 IPR001199 -
Mtr3g2279 876 PRINTS Cytochrome B5 signature 566 573 IPR001199 -
Mtr3g2279 876 PRINTS Cytochrome B5 signature 578 590 IPR001199 -
Mtr3g2279 876 Gene3D - 514 602 IPR036400 -
Mtr3g2279 876 Gene3D - 329 503 - -
Mtr3g2279 876 PRINTS Cytochrome B5 reductase signature 652 663 - -
Mtr3g2279 876 PRINTS Cytochrome B5 reductase signature 673 680 - -
Mtr3g2279 876 PRINTS Cytochrome B5 reductase signature 718 732 - -
Mtr3g2279 876 PRINTS Cytochrome B5 reductase signature 751 770 - -
Mtr3g2279 876 PRINTS Cytochrome B5 reductase signature 789 800 - -
Mtr3g2279 876 PRINTS Cytochrome B5 reductase signature 845 853 - -
Mtr3g2279 876 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 516 593 IPR036400 -
Mtr3g2279 876 SMART Cyt_b5_2 519 591 IPR001199 -
Mtr3g2279 876 SUPERFAMILY E set domains 329 454 IPR014756 -
Mtr3g2279 876 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 621 733 IPR017927 GO:0016491
Mtr3g2279 876 Pfam Cytochrome b5-like Heme/Steroid binding domain 523 590 IPR001199 -
Mtr3g2279 876 PANTHER NITRATE REDUCTASE 44 876 - -
Mtr3g2279 876 PIRSF Nitr_rd_NADH 8 875 IPR012137 GO:0006809|GO:0042128|GO:0050464
Mtr3g2279 876 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 516 591 IPR001199 -
Mtr3g2279 876 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 66 327 IPR036374 -
Mtr3g2279 876 Gene3D - 728 876 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2279 Mtr-Chr3 36450760 36456067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2279 607 867 NADPH P450 reductases AT5G17770 36.226 1.14e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2279 K10534 - gmx:732634 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2279 3 36450760 36456067 Mtr3g2279 3 36450760 36456067 ECH