Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2271 ATGGATGGGAAGTCTAACCTTCCGATCAAGTCTGATTCTTCTTCCCCACCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAGCGTCACCGTCCTCTCGGTACAGGGCAATCCAATATCATTAGGCCAAGACGCACGATTCTTCGTCAACCAACACATGATTTGATCTCAAACACAAACATTGATTCACCTGAAACTAGCACTGTTATTGCTCCTTCTCAATATGCAAATGTTCCCAATAAAGTTCCACAGGGGGCCAGTGATGAAAAGGCCATTGAGTTGGAGAATTTATCTTCTTATATGAGTTCACTTGGATTCACAGAAATGGAGTATATAGAAGGAAACCGAGCGGAAGCTTCGATTGGATTACAGGATGATTTAAAGCAACCCAAAATTCAGCAGGTTGAGCCTGATTTCAGTTTGAGATCCGATGGGGGAATGAGTTGCTCTATGTTGCCGAGGAGAGCTACGGTTACACGGGATGATTTACAGCAGTTTAGGAACTTTCTAAGTCAGCCAGCGACACAGTCTTCGGTTGTGGGACCTTCATGTGCGACAACTACCTCGGTTCATTCAACTTCAGCTCCCATGATGAATTCAACAACCCGTTTGCATCTAGATAGTGGCTCGCGCGTGGGTGCTGAACCTTTGGGAGAGATTGGTGTTTATCCTATAGCTGAAAGAGTTATGGAATCAGAAAATACAGAAGCTTCTGGTGAAAAAGACAATAAAATGTCAGTTGATAAGGCTGCAACTGCGGTGCAAGCTTCTGATTCTTGTGTCGGTGCCGAGTTGGCATCTAAAGAGAGTGATCAATCAAAGAAGCACCAAGAATGCATGTTAAAAGAAACTGGCAATTTGAAATATGCTTCTTCTGATGTTGACAAGTTAACCGACGGGAAAGAGCCTGTAGATGTTGCCCACGTACGGTGTCAGGCTCCAGTGCCCAAAACATCATTTTTGGATGTGAAATCTGAATATTCTAAGTTAGAAAAACCAGAGAAGGCTGCAAGTAGTAAAGGTTCATCGGTCTCTAAGAAAAGGTCTTATGATCCTGATTTATTTTTCAAGGTTAATGGAAAGCTTTATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAGGTGATTTCATCAGATTGTAGGATATATGCACTTAAGAAGATCAAACTCAGGGGTCGTGATTATGCTACTGCTTTTGGATTTTGTCAAGAGATCGAATATCTAAATAGGCTGAGAGGAAAGGATAATATCATACAGCTTATAGATTATGAGGTTACTGACAAGGCTTTGCTTGAACAAGTCATGAAAGGCTCTCTTAGTAATAAGGATGGCCGAGTCAAGGATGATGGATATATATACATGGTACTTGAATATGGCGAAATTGATTTAGCTCACATGTTGTCCCAGAAGTGGAAGGAGTTGGATGGATCCAACGAGACCATAAATGAGAACTGGCTTCGATTTTACTGGCAGCAAATTCTTCAAGCTGTCAATACTATTCACGAGGAACGTATTGTGCACTCTGACTTGAAGCCTGCTAACTTCCTCCTCGTCAAGGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGCGATACTACTAATATCCAACGAGAATCACAGGTTGGTACTCTGAGTTACATGTCTCCGGAAGCATTTATGTGTAATGAGACTGATGCGAACGGAAACATCATCAAGTGTGGTCGGCCGTCAGATATCTGGTCTTTGGGATGCATCCTTTATCAAATGGTATATGGGAGAACCCCCTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATAACAGATCCAAATCATGAAATTAAGTATGAACCACTTTCAAATCCATGGCTAGTAGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCATGTACTGCCTCATCCAACTTTGTCCCAAGACAGCAGCAGCTGTAAATTTGTACAACTTATTGCTGAAACTTGTACATATGACCCTGAAGCATCCAAACTTTGTCAGCAGCTCCAACGTCTTCTTGTTGACCCAATTGAGTTAACGACTCACTCACTAAACTCACGAGATCAACAAAGAACATTGTTGTCCCAAATGTCTGATCTCTGTATTCAGCTGCGGGAACGTTTGATAGATACTGATGTCAAATATTAG 2229 0.4213 MDGKSNLPIKSDSSSPPDFLRHVQAALKRHRPLGTGQSNIIRPRRTILRQPTHDLISNTNIDSPETSTVIAPSQYANVPNKVPQGASDEKAIELENLSSYMSSLGFTEMEYIEGNRAEASIGLQDDLKQPKIQQVEPDFSLRSDGGMSCSMLPRRATVTRDDLQQFRNFLSQPATQSSVVGPSCATTTSVHSTSAPMMNSTTRLHLDSGSRVGAEPLGEIGVYPIAERVMESENTEASGEKDNKMSVDKAATAVQASDSCVGAELASKESDQSKKHQECMLKETGNLKYASSDVDKLTDGKEPVDVAHVRCQAPVPKTSFLDVKSEYSKLEKPEKAASSKGSSVSKKRSYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLRGRDYATAFGFCQEIEYLNRLRGKDNIIQLIDYEVTDKALLEQVMKGSLSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGSNETINENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEIKYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVLPHPTLSQDSSSCKFVQLIAETCTYDPEASKLCQQLQRLLVDPIELTTHSLNSRDQQRTLLSQMSDLCIQLRERLIDTDVKY* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2271 742 Gene3D Phosphorylase Kinase; domain 1 356 443 - -
Mtr3g2271 742 SMART serkin_6 363 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2271 742 Gene3D Transferase(Phosphotransferase) domain 1 477 661 - -
Mtr3g2271 742 ProSiteProfiles Protein kinase domain profile. 363 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2271 742 PANTHER MIXED LINEAGE PROTEIN KINASE 11 714 - -
Mtr3g2271 742 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 11 714 IPR027084 GO:0004712|GO:0007093|GO:0051304
Mtr3g2271 742 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Mtr3g2271 742 CDD PKc_Mps1 361 656 - -
Mtr3g2271 742 Pfam Protein kinase domain 363 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2271 742 SUPERFAMILY Protein kinase-like (PK-like) 357 667 IPR011009 -
Mtr3g2271 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2271 Mtr-Chr3 36342473 36346772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2271 369 656 MAP Kinase Kinase Kinase AT4G08470 28.912 7.15e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Mtr3g2271 Pkinase 5.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2271 K08866 - gmx:100780144 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2271 3 36342473 36346772 Mtr3g2271 3 36342473 36346772 ECH