Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2268 ATGAGCAAATCCAAAATCCAAAGAAAGGTTACCATTACAAATCATATAAGCCAAAAAGAAAACCAAAAGCCACAAAAAACAGAAAAACAACCCTCTTGGGCAGTGGTAAGAGGTTTTTTGGCTTGTAAGAATGTTCAAATCCAACAACAGCAGCAGAAGGAAGCAAAACAGCAACAACAACCTCAACCTTTACCAGAACCAAAACAACCAAAGAAAAAACAAGAACAAAGGAAGCTGAAAGAAGAAAGAGTCTCAGAAGATACCAACAAGAAATGCAAGAAGATGAAATGTTCAGGTTCACTCTGCAACAACACTGGAATGACAATGGCAAAGCCAGAAACAACAACTTCAGCAACAACAACAAGAACAACTACAGATATTCACAAGAAAAAGGTTTCACTTGGTGGATGCAAAAACAACTTGGCTTCTAGTTCAAGCAGATCCATGAAAGCTCCTTTGAATGAACTCAACGGAAGAACTGTGTCGGCCTCTTCTTCGTCTTCGCTTTCAGCAGCATCTTCTAACTCTTCAGGAGCTGGTTCTTTCAGGGGAATGCAGTTTAGGAGACTCTCCGGTTGTTACGAGTGTCGAATGGTTGTTGACCCTGTTCTTGGTTTCACTAGAGACTCTTCTCTAAGAAGTTCCATTTGTTCTTGTCCTGATTGTGGTGAGATTATGAAAACTGAAAGCCTTGAACTTCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATAATATTTCACTCAAGCTGGCTAAAGAAGCAATCTCCCGTCTGTAAAATCGACCGCATCCTTAAAGTCCAGAACACACAGAAAACCATAACCAAGTTCGAAGAGTACAGAGACTCAATCAAAGCAAAAGCAACAAATCTCTCAAAAAAACATCCCCGCTGCATAGCAGACGGAAACGAGTTACTAAGGTTTCACTGCACAACCTTTGTTTGTTCTTTAGGCCTAAACGGTTCCTCAAATCTCTGCAACTCAACATCACAATGCAATGTGTGCGGCATAATAAAACACGGGTTTAAGTTGAATGGTGGCGATGGGATATTGACGACAGCAACGAGTGGGAAAGCACACGACAAAGCTAGTAGTGTTTTGGATGTTTCAGGTTGTGAGAGTGGTGATGAGAAGAGGGCAATGTTGGTTTGTAGGGTGATAGCAGGAAGAGTGAAGAAGAACATGGAAGGTGGTAGTAATGTTATGGAAGAGTATGATTCTGTTAGTGCTGGTGATGCTGGGGCTTATTCTAATTTGGATGAGTTGTATGTGAATAATCCTCGAGCTATTTTACCTTGCTTTGTTGTAATCTACAGAGGCTTTTGA 1359 0.4091 MSKSKIQRKVTITNHISQKENQKPQKTEKQPSWAVVRGFLACKNVQIQQQQQKEAKQQQQPQPLPEPKQPKKKQEQRKLKEERVSEDTNKKCKKMKCSGSLCNNTGMTMAKPETTTSATTTRTTTDIHKKKVSLGGCKNNLASSSSRSMKAPLNELNGRTVSASSSSSLSAASSNSSGAGSFRGMQFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIMKTESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVQNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSTSQCNVCGIIKHGFKLNGGDGILTTATSGKAHDKASSVLDVSGCESGDEKRAMLVCRVIAGRVKKNMEGGSNVMEEYDSVSAGDAGAYSNLDELYVNNPRAILPCFVVIYRGF* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2268 452 MobiDBLite consensus disorder prediction 46 62 - -
Mtr3g2268 452 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g2268 452 Gene3D - 240 450 - -
Mtr3g2268 452 MobiDBLite consensus disorder prediction 46 90 - -
Mtr3g2268 452 MobiDBLite consensus disorder prediction 157 180 - -
Mtr3g2268 452 MobiDBLite consensus disorder prediction 68 90 - -
Mtr3g2268 452 SUPERFAMILY ADP-ribosylation 241 451 - -
Mtr3g2268 452 MobiDBLite consensus disorder prediction 1 32 - -
Mtr3g2268 452 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 32 450 - -
Mtr3g2268 452 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 32 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2268 Mtr-Chr3 36315183 36317575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2268 182 450 C2H2 Transcription Factor Family AT1G75710 53.846 1.36e-98 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2268 3 36315183 36317575 Mtr3g2268 3 36315183 36317575 ECH