Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2260 ATGAAACTAATCATAAATTTTTCTTCCACTATTTTCCTTTTGTTTACTACTTCCATATCCGCTTACACATTTTCAGATCATATCTCACCGAATTTCACTGCTTCGTATCTTCAATTCATCGCTAACACTGGAACATTTTTGTTGTCTAGAAACAAAACATTCAAGGCAGCTATATTCAATCCTGGTAATCAACAAACAAGTTTCTATCTATGCATCATACATGCCGCGTCAAACACGGTCATTTGGTCTGCTAACCACGCGCCCATCTCAGATTCCGATACAGTGAAGCTAACTGTCGAAGGGATTACAATTTTTGACAAAAATGGAAATTCTAAATGGTCAACACCACCACTTAAATCACAAGTACAAAAACTTTCACTCACTGAGATGGGAAACCTTGTGTTACTTGATCAATCCAATGGTTCTCTTTGGGAGAGTTTTCAACATCCAACCGATACAATCGTTATTGGACAACGATTATCGGTTGGAGCATCATTGTCGAGTGCTTCATCGAATTCAAATTTGTCAACAGGAAATTACAAGCTGACAATAACTTCTTCTGATGCAATACTTCAATGGCATGGACAAACATATTGGAAAATTTCTATGGATTCAAAAGCTTACAAGAATTCAAATGATGATGTTGAATACATGGCAGTAAACACAACAGGTTTTTATCTCTTTGGACATAATGAACAAGTTCATGTATATCAAGTTGGTTTATCAGTAGCCAATTTTCGTGTCGCGAAATTGGCTTCCGATGGCCAATTTACTATTAGTAGCTTTTCAGGAACAAATTTGAAACAGGAATTTGTTGGACCAGATGATGGTTGTCAAATTCCATTAGCTTGTGGAAGAATAGGTTTATGTAATGATAATAGTTTATCATCATCATCATCATCAACTTCTTCTTCTTCACCGGTTTGTTCTTGTCCTTCAAATTTCCATGTTGCATCGGGTAATCTCCATGGTTGTGTTCCGAACGATGTGTCTCGTACTTTGCCATTAGCTTGTAGTTCTTTAACAAATAATAATCATAGTCAGTCAAATTCTTCAGTTGTTTCATTTTTAAATATAGGCTATGGTGTGAAGTACTTTGGAAATATTTATTCTGATCCAATTATGTTTGGAGTGAGTTTATCTGATTGTCAAGGTCATTGTTCAAGTAACTGTTCTTGTTTGGGAATTTTGTATAGAAATTCTTCTGGATCATGCTACATGATTGAAAATGAGTTAGGATCCATTAGTAATGGAGGTGAAGGTGACATGTTAGGCTTGATTAAAGTTAATATTGGCCATGATATTGATAATGAACAAAATTCTCAAAAAGATGGATTTCCTGTTATTGCTGCAGTGCTATTACCAATTGTTGGGATCATTTTTTTATTGGCTCTTGTTTTTTTTCTTATGTGGAGAAAATTTACAAAGTCGAAAAAACAAGAGGTGAAATTAGGGAAACAAATCTCAATCTCACAACATTCTTCAGGGGACTTGGATCAAGATGCCTTTTACATCCCTGGTTTACCGACGAGGTTTGATTACGAAGAACTTGAGGTAGCTACTGATAATTTCAAGACTCTGATAGGATCTGGTGCATTCGGCGTAGTGTACAAAGGTGTACTACCTGATAAGACTATTGTGGCAGTTAAGAAAATAATCAACATTGGAATTCAAGGGAGGAAAGATTTCTTCGCCGAGATTGCTGTTATTGGAAACATTCATCATGTTAATTTAGTTAGACTCAAAGGCTTTTGTGCTCAAAGGGGACACCGAATGTTGGTGTACGAGTACATGAACCGCGGCTCACTCGACCGGAACCTCTTCGGTGGACATCCGGTTTTGGAATGGCAAGAGAGGTGTGATGTGGCCCTTGGAACAGCGCGCGGACTCGCTTATCTTCACAGTGGATGTGAGCAAAAGATAATTCACTGTGATATCAAACCAGAGAATATTCTTCTGCATGATCAATTTCAAGCTAAGATATCTGATTTTGGACTTTCGAAACTCCTTAGTCCAGAACAATCTGGTTTGTTCACAACAATGAGAGGAACTCGTGGTTATCTTGCTCCGGAATGGCTTACAAATTCAGCAATTTCTGAGAAAACTGATGTATATAGTTTTGGAATGGTGCTTCTTGAATTGGTAAGTGGTAGAAAAAATTGTTCTTTCAAGTCAAGAAGTCATAGCATAGATGATGATCATAACAACAGCAGTGGTAATAATGGAAATTCATCAAACTCATCAACAACAGGACTTGTTTATTTTCCACTATATGCATTAGAGATGCATGAACAAAAGAGTTACATGGATTTGGCTGATCCAAGGTTAGAAGGACGTGTTACAATCGATGAAGTGGAGAAACTCGTTCGTATTGCATTGTGTTGTGTTCATGAAGATCCATCACTTAGGCCTAACATGGTTACTGTTGTTGGAATGTTAGAAGGTGGGACTCCATTGCCACAACCTAGGATGGAATCTTTGAATTTCTTGAGGTTCTATGGTCGTAGGTTTTCTGAGGCTTCTGTTATAGCAGAAGAGAATGAACATGGTTCTGTGAGGATTCAACAACCGCGTGATTCAACACGTTTCGTTAGTCGATTTTCTTACATATCTTCACAACAAATCTCAGGACCAAGATAG 2640 0.3742 MKLIINFSSTIFLLFTTSISAYTFSDHISPNFTASYLQFIANTGTFLLSRNKTFKAAIFNPGNQQTSFYLCIIHAASNTVIWSANHAPISDSDTVKLTVEGITIFDKNGNSKWSTPPLKSQVQKLSLTEMGNLVLLDQSNGSLWESFQHPTDTIVIGQRLSVGASLSSASSNSNLSTGNYKLTITSSDAILQWHGQTYWKISMDSKAYKNSNDDVEYMAVNTTGFYLFGHNEQVHVYQVGLSVANFRVAKLASDGQFTISSFSGTNLKQEFVGPDDGCQIPLACGRIGLCNDNSLSSSSSSTSSSSPVCSCPSNFHVASGNLHGCVPNDVSRTLPLACSSLTNNNHSQSNSSVVSFLNIGYGVKYFGNIYSDPIMFGVSLSDCQGHCSSNCSCLGILYRNSSGSCYMIENELGSISNGGEGDMLGLIKVNIGHDIDNEQNSQKDGFPVIAAVLLPIVGIIFLLALVFFLMWRKFTKSKKQEVKLGKQISISQHSSGDLDQDAFYIPGLPTRFDYEELEVATDNFKTLIGSGAFGVVYKGVLPDKTIVAVKKIINIGIQGRKDFFAEIAVIGNIHHVNLVRLKGFCAQRGHRMLVYEYMNRGSLDRNLFGGHPVLEWQERCDVALGTARGLAYLHSGCEQKIIHCDIKPENILLHDQFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRKNCSFKSRSHSIDDDHNNSSGNNGNSSNSSTTGLVYFPLYALEMHEQKSYMDLADPRLEGRVTIDEVEKLVRIALCCVHEDPSLRPNMVTVVGMLEGGTPLPQPRMESLNFLRFYGRRFSEASVIAEENEHGSVRIQQPRDSTRFVSRFSYISSQQISGPR* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2260 879 MobiDBLite consensus disorder prediction 726 746 - -
Mtr3g2260 879 PIRSF SRK 1 869 IPR024171 GO:0004674
Mtr3g2260 879 Pfam D-mannose binding lectin 79 162 IPR001480 -
Mtr3g2260 879 ProSitePatterns Protein kinases ATP-binding region signature. 528 551 IPR017441 GO:0005524
Mtr3g2260 879 Gene3D Transferase(Phosphotransferase) domain 1 598 819 - -
Mtr3g2260 879 CDD STKc_IRAK 528 815 - -
Mtr3g2260 879 CDD B_lectin 42 150 IPR001480 -
Mtr3g2260 879 SMART serkin_6 522 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2260 879 ProSiteProfiles Bulb-type lectin domain profile. 31 148 IPR001480 -
Mtr3g2260 879 SMART blect_4 38 150 IPR001480 -
Mtr3g2260 879 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 11 879 - -
Mtr3g2260 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Mtr3g2260 879 Gene3D Phosphorylase Kinase; domain 1 498 597 - -
Mtr3g2260 879 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 879 - -
Mtr3g2260 879 Gene3D - 42 157 - -
Mtr3g2260 879 ProSiteProfiles Protein kinase domain profile. 522 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2260 879 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 201 IPR036426 -
Mtr3g2260 879 Pfam Protein kinase domain 525 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2260 879 SUPERFAMILY Protein kinase-like (PK-like) 504 813 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2260 Mtr-Chr3 36253820 36256725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2260 453 822 Receptor kinase-like Gene Family AT5G20050 38.817 2.49e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr3g2260 Pkinase 8.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2260 - - ahf:112766506 1128.24