Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2259 ATGGATTTGATGGACATGGATGCCATCAATGACCTCCACTTCTCTGGACACAGCTCCCTCACCAACACCCCTACTTCCGACGAGGATTATGGTTGCACCTGGAACCACTGGTCTCCCATCGTCAACTGGGACACCTTTACAGGTGCCCCAGATGACTTTCACCACCTCATGGACACCATCATCGAGGACAGAACAACTGTCCTCGAACAGCTCAGTCCATCTATCACCACAACCACCACCACCACCACAACCACGGATGAGGAAGAAGAAGAAATGGAAACAACAACCACAACAACAACAACGGCAATAAAAACGCATGAAGTTGGTGATGATTCAAAAGGGCTAAAACTAGTGCACCTATTGATGGCTGGCGCGGAAGCCTTAACCGGTTCAACCAAAAACCGTGACTTAGCTCGAGTGATATTGATCCGGCTCAAGGAATTAGTCTCACAACATGCTAACGGCTCCAACATGGAGAGACTTGCCGCTCATTTCACCGAAGCCCTTCATGGACTACTAGAAGGTGCTGGGGGTGCGCATAATAACCACCATCACCACAACAACAACAAACATTACCTCACCACAAATGGTCCCCACGACAACCAAAACGACACACTTGCTGCTTTCCAACTACTTCAAGACATGTCACCTTACGTCAAATTCGGCCACTTCACAGCCAATCAAGCCATCATCGAAGCCGTGGCCCACGAACGCCGCGTCCATGTCATCGACTACGATATCATGGAAGGGGTCCAATGGGCCTCATTAATCCAATCACTTGCTTCCAACAACAACGGTCCACATCTTCGGATAACCGCATTATCGCGGACAGGAACCGGCCGGAGGTCAATCGCCACCGTACAAGAAACCGGCAGGCGATTAACCTCCTTTGCCGCTTCCCTCGGACAACCATTTTCTTTTCATCACTGCAGATTAGACTCCGATGAAACTTTCCGTCCTTCTGCATTAAAGCTTGTACGTGGAGAGGCTTTGGTTTTCAACTGCATGCTGAATTTACCTCACCTTAGTTACCGTGCACCGGAATCAGTTGCTTCGTTTTTAAACGGAGCAAAAACGTTGAATCCAAAGCTTGTGACGTTGGTTGAAGAAGAAGTTGGTTCTGTTATTGGTGGGTTTGTGGAAAGGTTCATGGACTCACTTCATCATTATTCAGCGGTTTTTGATTCATTGGAGGCTGGTTTTCCGATGCAGAACCGGGCCCGGACTTTGGTGGAGAGGGTATTTTTTGGGCCTAGAATTGCAGGCTCGTTGGGCCGGATATATAGAACGGGTGGTGAAGAGGAGAGAAGGTCATGGGGGGAGTGGTTAGGTGAGGTAGGGTTTAGGGGAGTTCCGGTGAGCTTTGCAAATCATTGTCAAGCAAAGCTGTTGTTAGGGCTTTTTAATGATGGGTATAGGGTTGAAGAGGTGGGTGTGGGTAGTAATAAGTTGGTGTTGGATTGGAAATCAAGACGTTTGCTTTCTGCTTCCCTTTGGACTTGTTCTTCTTCAGATTCTGATTTATAG 1527 0.482 MDLMDMDAINDLHFSGHSSLTNTPTSDEDYGCTWNHWSPIVNWDTFTGAPDDFHHLMDTIIEDRTTVLEQLSPSITTTTTTTTTTDEEEEEMETTTTTTTTAIKTHEVGDDSKGLKLVHLLMAGAEALTGSTKNRDLARVILIRLKELVSQHANGSNMERLAAHFTEALHGLLEGAGGAHNNHHHHNNNKHYLTTNGPHDNQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQSLASNNNGPHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAPESVASFLNGAKTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARTLVERVFFGPRIAGSLGRIYRTGGEEERRSWGEWLGEVGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLWTCSSSDSDL* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2259 508 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 501 IPR005202 -
Mtr3g2259 508 PANTHER SCARECROW-LIKE PROTEIN 26 4 501 IPR030028 -
Mtr3g2259 508 MobiDBLite consensus disorder prediction 75 98 - -
Mtr3g2259 508 ProSiteProfiles GRAS family profile. 108 500 IPR005202 -
Mtr3g2259 508 Pfam GRAS domain family 117 500 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2259 Mtr-Chr3 36218465 36220452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2259 95 503 GRAS Transcription Factor Family AT3G54220 35.731 2.40e-51 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr3g2259 GRAS 7.7e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2259 - - gmx:100782300 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2259 3 36218465 36220452 Mtr3g2259 3 36218465 36220452 ECH