Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2249 ATGAGTGCCAAAAATCAGATTTCTAGATTAATTCTTCTATTTATTAATGCTAAACCATATTTGTTAATGATTGGCCTTCAATTTGGTATGGCTGGGAATTACATCTTTGGTAAAGATATTCTTAACCATGGGATGAGCCGGTTTGTGTTCATCGTTTATCGCAATGCCATGGCCGTGATCGCTCTTGCGCCGTTTGCATTCTTTCTCGAAAGGAAGAGTAGGCCAAAGATGACACTCCCTATCTTCCTACAAATAATGGTGCTGGGATTTCTAGAGCCAGTTTTTAACCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCAGCTTCATTCACATCTGCTATTATGAATGCCGTGCCTTCTATCACCTTTCTTCTTGCAGTCATCTTCCGGTTGGAGCGTCTTAAATGCAAGGAAATTCGAAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTCGGTGGTGCATTGCTAATGGCAATTTACAAAGGACCTGGATTCAACATTTTCCATTCTGGAACCCAAAATCAAAATGGAACTCACGAATCCTCTCATAACCATCAAACTGCTGGAGCTCTTTATATACTGATGGGCTGTGTGGCTTTATCTTCTTTCTACATTTTGCAGTCGATAACGGTAAAAAGATATCCAGCTGAGCTATCATTGGCAACCTTGATATGTCTCGCGGGAGGAGCACAAGCAACTGCGGTGGCACTTGTGGCCGAACGTCATTCACATGCTTGGGCCATTGGCTGGGATTATAGGCTCTATGCTCCTCTTTACACGGGAATAGTTAGTTCAGGAATTGCATACTATGTTCAAGGGCTGGTGATGCAAATGAGAGGCCCAGTTTTTGCAACAGCTTTTAATCCTCTTTGCATGATCATCGTTGCTTGTTTGGGCTCCTTTTTTTTAGGAGAAAATCTTTACCTTGGAAGTATGATTGGAGCTGTTATCATTGCACTAGGCCTTTATACAGTTGTGTGGGGAAAAGCCAAAGACTATTCAGAATCAGACACCAAATTACCATCATCAACCATTGAAGGGGAGACAAAATCAATGCCAATTACTGCAATAGATGATCCCAAAATTGATATTATTGCTGTTAATTTGGAAAACCAACCACCATCAAAGGATAAATTAGAGGAGCCCAACAAATTGGAGAAAGAATCAGAGTTGTATGTAGCAATAACGGTTTAA 1200 0.4075 MSAKNQISRLILLFINAKPYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNAMAVIALAPFAFFLERKSRPKMTLPIFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLLAVIFRLERLKCKEIRSQAKVIGTLVTFGGALLMAIYKGPGFNIFHSGTQNQNGTHESSHNHQTAGALYILMGCVALSSFYILQSITVKRYPAELSLATLICLAGGAQATAVALVAERHSHAWAIGWDYRLYAPLYTGIVSSGIAYYVQGLVMQMRGPVFATAFNPLCMIIVACLGSFFLGENLYLGSMIGAVIIALGLYTVVWGKAKDYSESDTKLPSSTIEGETKSMPITAIDDPKIDIIAVNLENQPPSKDKLEEPNKLEKESELYVAITV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2249 399 PANTHER WAT1-RELATED PROTEIN 12 367 - -
Mtr3g2249 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 332 - -
Mtr3g2249 399 PANTHER WAT1-RELATED PROTEIN 12 367 IPR030184 GO:0016021|GO:0022857
Mtr3g2249 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Mtr3g2249 399 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Mtr3g2249 399 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2249 Mtr-Chr3 36137503 36140607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2249 16 340 Nodulin-like Gene Family AT2G37460 51.534 6.48e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2249 - - mtr:MTR_3g072560 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2249 3 36137503 36140607 Mtr3g2249 3 36137503 36140607 ECH