Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2248 ATGGAAAAAATAGGTGTTGCTAATAAAATGAATAAGGCAAGGCCTTATGTGTTAACAGTGGCACTTCAATTTGGGTTTGCAGGAGCATACATATTCTCCATGGCCAGTTTCAACATGGGAATGAATCGTTTTGTGTTCATTGTTTATCGTAATGTCATTGCTGCAATTGCCCTTGCTCCCTTTGCACTCATTTTTGAAAGGAAAATTAGGCCAAAGATGACAATGGCTGTCTTTTTGCGGATAATGGCGCTCGCATTTTTGGAGCCAGTGATAGATCAAGGATTTACTTTCTTGGGGATGCAATATACATCGGCTTCATTTGCTTCTGCTTTGATGAATGCTGTTCCTTCTGTTACCTTTGTGCTAGCCGTAATTTTCAGGATTGAACGTGTAAATATGAAGGAAATACGAAGCATAGCAAAAGTGATTGGGACATTAGTAACATTTGCAGGGGCATTGATGATGATACTTTACAAAGGCCCACAAATTCATCTTTTCTATTCTCCAAAAACAGCACATAATTCTGCAAGTCACGACACGCAAACTCTCAAACATTGGGTCTCAGGAACACTCTTTCTAATGCTGGGTTGTGTGGCTTGGTCATCTTTCTTCATTTTACAGTCAGTAACGTTGAAAAAGTATCCAGCAGAAATGTCACTATCAACCTTAATATGCTTAGTTGGTGCTATGCAAACTAGTGTGGTGGCTTTGATTGCTGAGCGTCACTCTGGTGCTGGGGTTTGGGCTGTTGGTTGGGACTTTAGACTATATGGTCCTCTCTACACGGGAATAGTTACCTCAGGAATAACTTATTATGTGCAAGGGTTGGTATTGCAAAGCAGAGGACCAGTATTTTATACAGCATTTAACCCCCTTTGTATGATCATCACTTGTGCTTTAGGTTCCTTCCTTTTTGCAGAACAACTCCACTTGGGAAGTATCATTGGAGCCCTGATTATTGCAGTTGGTTTATATTCTGTGGTGTGGGGTAAAGCAAAAGACTATTTATCAGACACAACTACACTGCCACCATCACCAGTTGCAATGAAGCAAACTGAGAAACAACTTCCAATTACTTCATCTGATGTCTAA 1092 0.4038 MEKIGVANKMNKARPYVLTVALQFGFAGAYIFSMASFNMGMNRFVFIVYRNVIAAIALAPFALIFERKIRPKMTMAVFLRIMALAFLEPVIDQGFTFLGMQYTSASFASALMNAVPSVTFVLAVIFRIERVNMKEIRSIAKVIGTLVTFAGALMMILYKGPQIHLFYSPKTAHNSASHDTQTLKHWVSGTLFLMLGCVAWSSFFILQSVTLKKYPAEMSLSTLICLVGAMQTSVVALIAERHSGAGVWAVGWDFRLYGPLYTGIVTSGITYYVQGLVLQSRGPVFYTAFNPLCMIITCALGSFLFAEQLHLGSIIGALIIAVGLYSVVWGKAKDYLSDTTTLPPSPVAMKQTEKQLPITSSDV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2248 363 PANTHER WAT1-RELATED PROTEIN 10 357 IPR030184 GO:0016021|GO:0022857
Mtr3g2248 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Mtr3g2248 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 332 - -
Mtr3g2248 363 PANTHER WAT1-RELATED PROTEIN 10 357 - -
Mtr3g2248 363 Pfam EamA-like transporter family 18 156 IPR000620 GO:0016020|GO:0016021
Mtr3g2248 363 Pfam EamA-like transporter family 188 328 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2248 Mtr-Chr3 36120003 36125339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2248 7 362 Nodulin-like Gene Family AT4G08300 51.105 3.52e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2248 - - gmx:100812537 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2248 3 36120003 36125339 Mtr3g2248 3 36120003 36125339 ECH