Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2247 ATGGGTGCGTGGTTGAAAAATGCAAAGCCATATCTACTATTGTTGGCTGTTCAATTTGGTTCTGCTGGTATGTTCATTTTTGCCATGGATGCTATCAAGAAAGGCATGAGCCATTATGTTTTCATCGTTTACCGGAATGCCATCGCTGCTGTAACGTTAGCTCCCTTCGCATTTCATCTAGAAAGGAAAATTAGGCCGAAGATGTCTGTCCGTGTATTTTCAGAGATTATGTTACTGGCTTTCTTTGAAATAATACTTGATCAATGTTTTGCCCTGCTGGGGATGAAGTTAACGTCTGCGTCGTTCTTGTCAGCTGTGATGAACTCCGCGCCCTCTGTTACTTTTGTGTTTGCGGTCATTCTAAAACTGGAGCACATGAAGATCAAGGAGATAGCATGTCAAGCAAAAATAATCGGCACAATTGTAACATTTGGAGGAACATTGCTAATGGCTCTGTACAAAGGTCCTGTGGTTAGTGTTGTGAGGTCATCCATCAGTCATGCTACCCGCCAGCCTGAAAATGTGAGCGACCCCTCCGGTGACCGGTGGATCATAGGGACATGTTTCCTCCTCATTGGGTGTGCTGGCTTTTCCGCGTTTTACATATTGCAGGCCATAACGTTGAGAAAGTACCCAGCACCAATGTCTCTGGCAACTTGGGTTTGTTTCATTGGCGCACTTCAAAGCTTCGTGGTAGCATTCTTCGCAGAGCGCCACAACTCTCATGCTTGGGCTCTTGGTTGGGATACAAGACTCTTTGCCCCAGCTTACGCGGGAATAGTTACATCAGGAGTGCAGTATTACATACAAGGTCTGGTTATAAAAACTATGGGACCAGTTATTGTAACTGCTTTTAATCCTGTACGTATGATCATCGTAACGGCCCTGGCTTGCATCATCCTCTCTGAACAACTTTTTCTTGGAAGTATTATTGGAGCCATAGTGGTGGTTCTTGGGCTTTATCTAGTTGTGTGGGGAAAATCAAAAGAATACAAAGCTCGAAATCATGTTGATATGCCACCCTCCCCTACAAAAGAGGACTCATTGCAAGACCAACAGCAGCAGCTACCAGTTACAGCTCCTAGAAATGAAAGTAACGATATTAATAAAGCACAATTGGTCATACACAGTGAAGAAAAATGTCACGGTTGTGGCCAAAATTAA 1164 0.439 MGAWLKNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIAAVTLAPFAFHLERKIRPKMSVRVFSEIMLLAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSVTFVFAVILKLEHMKIKEIACQAKIIGTIVTFGGTLLMALYKGPVVSVVRSSISHATRQPENVSDPSGDRWIIGTCFLLIGCAGFSAFYILQAITLRKYPAPMSLATWVCFIGALQSFVVAFFAERHNSHAWALGWDTRLFAPAYAGIVTSGVQYYIQGLVIKTMGPVIVTAFNPVRMIIVTALACIILSEQLFLGSIIGAIVVVLGLYLVVWGKSKEYKARNHVDMPPSPTKEDSLQDQQQQLPVTAPRNESNDINKAQLVIHSEEKCHGCGQN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2247 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Mtr3g2247 387 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Mtr3g2247 387 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020|GO:0016021
Mtr3g2247 387 PANTHER WAT1-RELATED PROTEIN 7 359 - -
Mtr3g2247 387 MobiDBLite consensus disorder prediction 345 365 - -
Mtr3g2247 387 PANTHER WAT1-RELATED PROTEIN 7 359 IPR030184 GO:0016021|GO:0022857
Mtr3g2247 387 MobiDBLite consensus disorder prediction 335 365 - -
Mtr3g2247 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2247 Mtr-Chr3 36109224 36111654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2247 5 375 Nodulin-like Gene Family AT2G39510 44.744 5.17e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2247 - - gmx:102665912 585.104