Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2246 ATGGAGGACCAAAATGCTAATGGTAAGTTGAACAAAGGAGCACTGCTTCGAAAGATTAAACCATATCTTGCTATATTATCCCTTCAATTTGGTTACTCGGGGATGTACATCATTACTATGGTTTCTTTCAAACATGGTATGAGCCATTGGATTCTCTCCGTGTACCGTCATGTTGTGGCCGCAATTATAATTACTCCTTTCGCTCTTGTGCTCGAAAGAAAAACAAGGCCAAAGATGACTCTCCCCATCTTCCTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAAAACTTGTACAACATGGGAATGAAGATGACATCAACAACGTTTGCATCTGCCACTGTTAATGTCCTTCCAGCTATTACTTTTATAATGGCTCTCACTTTCAGGTTAGAGTCAGTGAACTGGAGAAAATTTCACAGCGTAGCCAAAGTAATTGGAACGGTTGTAACCGTTTCAGGAGCTATGGTTATGACTTTGTACAAAGGCCCTGCCTATCAAATCATAAAGGGAGGAGGAGCCATCAACCACCACGCCTCCGCCACAACCGACCAACCATCTGAGCAAAATTGGTTGATGGGCACAGTAATGCTTATATCAAGTTGTTGTAGTTGGGCTGGATTCTTTATTTTACAATCATTCACTTTGAAGAAGTATCCAGCAGAGCTATCACTAACAGCATGGATTTGCTTGATGGGTATTATTGAGGGTTCAATTGCATCACTTATATTTGAAAGAGACATGAGTGTGTGGGTCATAGGTTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCAGGTGTTATATGCTCTGGAATGGCATATTATGTACAAGGAGTTGTAACTAGAGAACGTGGACCAGTTTTTGTAACATCTTTTAGTCCACTATGTATGATTATCACTGCTGCATTGGGTTCTCTTGTCTTAGCTGAACAAGTTCATCTTGGAAGTATATTTGGAGCTATTATCATCGTTATTGGTCTTTACACTGTGGTATGGGGCAAAAGCAAAGATCGTCGTGAAAGTGCAGATGAAATAGGAAAAGGTGAAAGCAAAGATCAATTGCCAATCAAGAATGGTACAAAATCAGGATCAGAAATTTTTGATGGCATTGAGATTAATGTTCCAGCTGAAAAATTGAAAAAAGGAGAAGCAAAAAATGTTCCAACACAAGCATGA 1185 0.4017 MEDQNANGKLNKGALLRKIKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIITPFALVLERKTRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALTFRLESVNWRKFHSVAKVIGTVVTVSGAMVMTLYKGPAYQIIKGGGAINHHASATTDQPSEQNWLMGTVMLISSCCSWAGFFILQSFTLKKYPAELSLTAWICLMGIIEGSIASLIFERDMSVWVIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAIIIVIGLYTVVWGKSKDRRESADEIGKGESKDQLPIKNGTKSGSEIFDGIEINVPAEKLKKGEAKNVPTQA* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2246 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
Mtr3g2246 394 PANTHER WAT1-RELATED PROTEIN 15 367 - -
Mtr3g2246 394 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Mtr3g2246 394 Pfam EamA-like transporter family 31 155 IPR000620 GO:0016020|GO:0016021
Mtr3g2246 394 PANTHER WAT1-RELATED PROTEIN 15 367 IPR030184 GO:0016021|GO:0022857
Mtr3g2246 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 156 - -
Mtr3g2246 394 MobiDBLite consensus disorder prediction 344 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2246 Mtr-Chr3 36094561 36098313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2246 12 376 Nodulin-like Gene Family AT4G08300 64.075 1.16e-169 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2246 - - gmx:100783910 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2246 3 36094561 36098313 Mtr3g2246 3 36094561 36098313 ECH