Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2241 ATGGCCGATCCCGTCACAGATCTCAGTCCCTCCGGCGACGACGCCCCGGTCCGTAACGTCCGCCGGAGATTAGTCCAATCGACGCTCTTCCCTCTCAAGCCACCGCTCAACAAGCCAGAAGAAAACGACGATAGCGGCGATGAACAAGATGAGGATTATTGCGACACGAAGAAGAATCGTAGGAAGAGAAAATCCAAAGGAAAAATTACTCCGTTAAATAAAGGTTCTAAGAGTGCCACACCAAAGAAAAGTGCTAGTGGAAAGAAGACTAATGAAAAAACCTCTATAGCTAATGGAATTATGGGGTCAACTTCGCGGAATGTTTTGTCTGATTTCGATAAAGTTGTTACACCGAAGCCTGATCTGCGGTTAGAGGCAAAATTGTCAGCTGAGGAAAATTCAAGGTTGTTTGCAGGACGGAAAGTACATCCACTTTTTTCATCGTGTAAAGCGGGGAAGAAAGTTCAGGAGCTGTCTGAATCAGGACGTAATTTATTCAAAGCTAAGAGTGGGGATGAAAGTATTACCTGCGGTCCTATTCATGTATTTGAAAATATCAAGGATGATACCTCATCCCTAGACTGGAGAAACTGGACATTTTTGGGAAATTCCACCTATGTGAATGGTTGTTCAGAAAGTTCAAATTCATCTGTTTTGGAGGGTTCTGTTGAATGCTTAAATTTTGAGAAGATTCTCAGTACTCTGAATCCAGCGGCAGCTTCAAATTTTCATAATGCCTCAACTTCTTTGGATAGTTTTTCTGTGCTTCCAGAAAATCTGCAAGAAACAGAGGAGCAAACAATAAGTGCTTCGATGCCAAAAGATGCCAAAGTGGACTTTGGGGTGGATGAATCTCTTGCTTTTTCACTGCAAGCTGGCTATTTTAGAAAATCATATACTGAACCATTGAGTAGATTTCTTCAAGAAAGTATGAGGTCATCCTATGTTGGTTGTGAGGATAAGGCAGAAGGCAGCTTATGGACATACAGATACAAGCCTACTAAGGCCGTCGAGGTATGTGGTAATGATGAAGCTATGAATTTCTTGAGTGACTGGCTACATCAGTGGCATGAAAGACGTTACAAACCCAGGAAGGATACGTCTAATAGGGATACAAGGATCATGCAAGACGACGACGATGATGATTATATCTGTTCTGACAGTGACTATGATTCGGAAGATATGAATGAAGAGGATTCCCTGCAGAATGTTCTTTTAATTACAGGACCAACAGGGAGTGGCAAGTCTGCAGGAGTCTATGCTTGTGCCCAAGAGCAAGGTTTTGACATATTAGAGCTCAATACATCAGATTGTAGAAATGGGACTGCTGTCAAGGAGTTTTTTGGAGAGGCTCTTGGTTCACACGGGATCAAAAGGTTTTCAGAACACACTGTGAGTTCGCAAAAGATAACTACAAAGTTGCCCCCAGCTCCTGCTTTAGTTAACTGTAAAACTGCGGATGAGGTGAATGACGGAGTAGTTGAACTGATAACCTTATTTGATGATGAAGCCAGCCCTGGTGAAACATCACAAAAGTTAATTGGCAAGAATAATGTAGCTTGTGATAAAGGCCAAACTTTAATTTTGGTTGAGGACGTGGACATACTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACAGCAAAGGGGCCAATTATATTGACCAGCAATTGTGATAATCCTGGCCTGCCAGATAATTTTGATAGGCTTCATATTTCGTTCTCATTGCCAACACCAAAGGAGTTGCTTTGCCATTTGTACTCTGTTTGTCTCAGAGAAGGAGTCAGCATCCATCCTCTTCTACTGGAGAAGTTTATACAGTCCTGTGATGGAGACATCCGGAAAACCCTTATGCATCTCCAGTTCTGGTTGCAGAGTAAAATATTTAGAAAAGATCGAAAAGTGCAGACGGGCTATGTCTCACTTCCATTTGATCTTGAGGTTGGTCATCAGATACTACCAAAGATAATGCCGTGGGATTTCCCCTCAGAGATATCCGAACTAGTTGAGAACGAATTTGTCAAATCAATAAATAAAATGGAAGAGGATTCCAGTGTGCAATGGTTAGTTGATGACGAGCTTCACATAAATGAAAGTCAAAATGATTTAGATGAGCAGTATATGGAGACTGATTATATAAAAGCCAAGAAGGTGGAGATGATTCAGAGAAATGGGTCTATAACAGATTACAGTGAGCTTGAAATTCAATGCAAAGTTATATCTGAGTTTTCCAATTCTTCTGGATCCCCTGTAGCATCCTATCTGCAAAATGGTCGAAGGAAACTTGTAGTAATGTCCTCTGATTCTGAGGAGGAGGATTCAAATAACCGATATCCTCGAGACACCGAAGATGAAGCTAACCAGAGACATTCCATCAAAGGAAACAATGAATGTACGTCTGAGTTTCAGTTAAACGATAACTGCCCCAGCACATCTGTTCGTAAACTGGTTTGTTCTGAATTGGAGGATTCAGTAGAGGAGCATGTTAAATATTCAGAAATAGCTAATGTTACCCCAATAAATGAGACATCTGAAACGTTTGATATATCCTGTGTACCAGAATCAACATATGTTCCTGAGACTGCAATTGAAAGTGGAACAGATACAATGTCTGGAGTGGTATCTTATGGCCACTGTTTAGAAGCTTCTATGAATAATGAGTTGAAACCGTTAACTTTCAGTGTTCGCAGGCGCTTATCAAAATTGTCAGAAAATTCAGATATGCTTATGGATACTGAAATTCCAGAAACTACAATTATCAAGGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTGAAGTCAACATTTGTCGAGTCCAGTCCATCACTGGAAACAGATATGGTACAGAATTTGTGGAAAAAACTCCGACAAATGGATTTAAAGCAGCATACTATCTCAGAACAGCTAGGTGCTTCTCAAGTTGTTAAACTTGCTAGCGGATTGAGCAATCTCATTTCAGAAGCGGATTTGTTTCACAATTACCAGCATAAACATGATATTTTGGAGCCCCAAAGCTTCGTTTCTAATGAAGCTACAACCAGTTCGTACAATGATGAAACAATGACGTCCACCATTGCTGTACATGGGTTTTGTTTTTTTGTTAAACTTATAGCAGATGTTGGATCAACGTTGGGTTGTGCAAACAAGATTGATTTAACTTCTGAGATGTTGGCCTCCACAACTAATAGTATGGCATTGGGGAAATTATCCGGACTGGATCTTGCCAAAAGCACGGGTATTTATACTGGGAAGGAGTTAGAGTTAAACAACCCAACAAATAATATGAAGAAGAGTGAAAATAAAGCATCTCTGTTTGAGGTTGTCCAATCCATTGTTCCTGCAAGAATATCCTTAGCATTGAAAGGTGATATCTTCAATGAATATCTATCTTCATTGCGCCAAATTTCAAGGTCAGAAGCAGCCTGTGTTTCACAAGGAGTTGAAAAGAGAAAAGCAAGGTCGCGGGGTGCTCAACATTATTTGAGCAGATGTACAGAGTTGTCTCCTGAAGATATAAAATTGGTCAGTGAAGGTGATTTGTACAGAAAGACATCTTCACAAAAAACTAATGCAGAAAGTAAACTATTATAG 3612 0.4045 MADPVTDLSPSGDDAPVRNVRRRLVQSTLFPLKPPLNKPEENDDSGDEQDEDYCDTKKNRRKRKSKGKITPLNKGSKSATPKKSASGKKTNEKTSIANGIMGSTSRNVLSDFDKVVTPKPDLRLEAKLSAEENSRLFAGRKVHPLFSSCKAGKKVQELSESGRNLFKAKSGDESITCGPIHVFENIKDDTSSLDWRNWTFLGNSTYVNGCSESSNSSVLEGSVECLNFEKILSTLNPAAASNFHNASTSLDSFSVLPENLQETEEQTISASMPKDAKVDFGVDESLAFSLQAGYFRKSYTEPLSRFLQESMRSSYVGCEDKAEGSLWTYRYKPTKAVEVCGNDEAMNFLSDWLHQWHERRYKPRKDTSNRDTRIMQDDDDDDYICSDSDYDSEDMNEEDSLQNVLLITGPTGSGKSAGVYACAQEQGFDILELNTSDCRNGTAVKEFFGEALGSHGIKRFSEHTVSSQKITTKLPPAPALVNCKTADEVNDGVVELITLFDDEASPGETSQKLIGKNNVACDKGQTLILVEDVDILFPEDRGCIAAIQQIAETAKGPIILTSNCDNPGLPDNFDRLHISFSLPTPKELLCHLYSVCLREGVSIHPLLLEKFIQSCDGDIRKTLMHLQFWLQSKIFRKDRKVQTGYVSLPFDLEVGHQILPKIMPWDFPSEISELVENEFVKSINKMEEDSSVQWLVDDELHINESQNDLDEQYMETDYIKAKKVEMIQRNGSITDYSELEIQCKVISEFSNSSGSPVASYLQNGRRKLVVMSSDSEEEDSNNRYPRDTEDEANQRHSIKGNNECTSEFQLNDNCPSTSVRKLVCSELEDSVEEHVKYSEIANVTPINETSETFDISCVPESTYVPETAIESGTDTMSGVVSYGHCLEASMNNELKPLTFSVRRRLSKLSENSDMLMDTEIPETTIIKVMDECSRVDFKLKSTFVESSPSLETDMVQNLWKKLRQMDLKQHTISEQLGASQVVKLASGLSNLISEADLFHNYQHKHDILEPQSFVSNEATTSSYNDETMTSTIAVHGFCFFVKLIADVGSTLGCANKIDLTSEMLASTTNSMALGKLSGLDLAKSTGIYTGKELELNNPTNNMKKSENKASLFEVVQSIVPARISLALKGDIFNEYLSSLRQISRSEAACVSQGVEKRKARSRGAQHYLSRCTELSPEDIKLVSEGDLYRKTSSQKTNAESKLL* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2241 1203 MobiDBLite consensus disorder prediction 1 99 - -
Mtr3g2241 1203 MobiDBLite consensus disorder prediction 771 795 - -
Mtr3g2241 1203 CDD AAA 405 466 - -
Mtr3g2241 1203 Gene3D - 324 575 IPR027417 -
Mtr3g2241 1203 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 115 1199 IPR004582 GO:0006281
Mtr3g2241 1203 MobiDBLite consensus disorder prediction 71 99 - -
Mtr3g2241 1203 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 115 1199 - -
Mtr3g2241 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 637 IPR027417 -
Mtr3g2241 1203 Gene3D - 583 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2241 Mtr-Chr3 36034955 36044682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2241 327 628 Core DNA Replication Machinery Family AT5G22010 22.508 1.90e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2241 - - gmx:100784209 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2241 3 36034955 36044682 Mtr3g2241 3 36034955 36044682 ECH