Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2229 ATGGATTGTTGTGTGTGCACAACTATGCCATTAATATTAAGGCCTCCAAGGAATACAATATGTGGGGCATGTTATGAAGGAGTTAGGAGCATAATCAACATGATGAATGGTCTTGAAACTGAGAAAGCAAAAACAATCACTACTCCGAATGATTCTCCTGTTTCGCGGCGAAATTCGAGTAAGACACTTGATGATTGTGTAAGATGGTGTTCTGAGCAAATAGACCAATTTAATCAACAAAAACAAGATTTGGCTTATCTCAGAGGTTTTGCTGCTGCCTTCAAAGAACAAATTCACACAGATATATTGATAAGTCCAGGCAATCATGGTCCACCTATACCTGCACATAAATCCGTTTTGGCTGCAAGATCAGAAATTTTCAAGAATATGCTAGAGATTGATGAATGTAAAGCTGCACCAACTTGTAACACAATAACTATACCTGACCTAAACCATGAAGAACTAGAATCTCTCCTAGAGTTTCTCTACAGTGGTACATTACCTTTGGAAAAATTGGAGAAACATGTGTATGCCTTGTCACAAGCAGCTGATAAGTATATTATCCCACATTTGCTGAAATACTGTGAAAGATACTTGTTCAGCTCACTTAGTACTTCTAATGCATTTGAGACACTAGAAATTGCTGATACTTGTTCAAACCAAGATTTGAAGGAGACAACCTTTAATTTCTTAGTTAAAAATATTGGGCTTATGGTTACTTCTCCTAAATTTGAAGCTTTTGTGCATAGGAGTCCACATTTAACTGTGCAATTAGTTTCAAGAGCATTTGTGAATGGTTCCAAATTATCAATTTCTCTATAA 822 0.3625 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMNGLETEKAKTITTPNDSPVSRRNSSKTLDDCVRWCSEQIDQFNQQKQDLAYLRGFAAAFKEQIHTDILISPGNHGPPIPAHKSVLAARSEIFKNMLEIDECKAAPTCNTITIPDLNHEELESLLEFLYSGTLPLEKLEKHVYALSQAADKYIIPHLLKYCERYLFSSLSTSNAFETLEIADTCSNQDLKETTFNFLVKNIGLMVTSPKFEAFVHRSPHLTVQLVSRAFVNGSKLSISL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2229 273 SUPERFAMILY POZ domain 85 201 IPR011333 -
Mtr3g2229 273 SMART BTB_4 100 203 IPR000210 GO:0005515
Mtr3g2229 273 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 268 - -
Mtr3g2229 273 CDD BACK 204 244 - -
Mtr3g2229 273 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 268 IPR044784 -
Mtr3g2229 273 Gene3D - 205 269 - -
Mtr3g2229 273 Gene3D Potassium Channel Kv1.1; Chain A 70 204 IPR011333 -
Mtr3g2229 273 Pfam BTB/POZ domain 94 200 IPR000210 GO:0005515
Mtr3g2229 273 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr3g2229 BTB 7.5e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2229 K10523 - gmx:100777561 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2229 3 35909716 35911479 Mtr3g2229 3 35909716 35911479 ECH