Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2226 ATGGAGCCATCACCAAAGTCCAATAAAAGGATGTGTACAATCCTTGCAAAAAGAATTAGGACTATACCAGTATATTTGTATTTGGATCTATTATTTCTTGTGGCTTCTAGTATTCTCAACTTTCCACAAGGACAAATCAGCATCAGAAAGCCCCGCACTATTGGTCATGTGGATCATGGAAAAACCACACTAACTGCTGCAACTACAAAGGTACTAGCTGCTGAAGGTAATGCCAAGGCCATTGCTTTTGATGAAATCGACAAGGCTCCTGAGGAAAAGGAGAGAGGAATTACTATTTCTAGGTCTCATGTTGAGCTTCCAATTGTGAGCGGTTCGGGTCTGTATGCCTTGCAAGGGACTAATGAAGAACTAGGAGAGAAAGCTATCTTGAAACTAATGGATGCTGATCCCGTTCGACAGCTTTATAGACCTTTTGTAATGCCAATAGAAGATATTTTCTATATTCAGGGGCGTGGAACTGTTGCCACTGGTCATGTTGAACAAGGTACTATCAAAGTTGGTGAAGAGGTTGAAATACTAGGACTGACACAGGGTGAACCTTTGAAGACTACTGTAACTGGTGTGGAAATGTTTAAGAAACTTGTGGATAGAGGAGAAGCTGGTTGTAAAGTAGGACTTCTTCTACCAGGTCTTAAGCATGGTGATGTGCAGAGGGGGATGGTTATCGCCAAGCATGGTACATTGAAAACATATAAGAAGTTTGAAGCACAAATTGTTTATGTCCTCTCTAAATTTTACCTGAGGACTGCAGACATTACCGAAAAGGTACAATTACCTGATGATGTCAAGATGGTTATGCCTGGTGATAATGTGACTGCAACTTTTGAGCTGACGTTACCTTATCCTCTTGATCATGGACAAATATTTTCTTTGAGAGAAGGAGACCGGACAGTTGCTGCAGGAGTTGTCTCCAAAGTCCTTTCCTAG 948 0.4135 MEPSPKSNKRMCTILAKRIRTIPVYLYLDLLFLVASSILNFPQGQISIRKPRTIGHVDHGKTTLTAATTKVLAAEGNAKAIAFDEIDKAPEEKERGITISRSHVELPIVSGSGLYALQGTNEELGEKAILKLMDADPVRQLYRPFVMPIEDIFYIQGRGTVATGHVEQGTIKVGEEVEILGLTQGEPLKTTVTGVEMFKKLVDRGEAGCKVGLLLPGLKHGDVQRGMVIAKHGTLKTYKKFEAQIVYVLSKFYLRTADITEKVQLPDDVKMVMPGDNVTATFELTLPYPLDHGQIFSLREGDRTVAAGVVSKVLS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2226 315 PANTHER ELONGATION FACTOR TU, MITOCHONDRIAL 105 315 - -
Mtr3g2226 315 PANTHER ELONGATION FACTOR TU, MITOCHONDRIAL 52 105 - -
Mtr3g2226 315 Pfam Elongation factor Tu GTP binding domain 49 117 IPR000795 GO:0003924|GO:0005525
Mtr3g2226 315 PANTHER ELONGATION FACTOR TU-RELATED 52 105 - -
Mtr3g2226 315 PANTHER ELONGATION FACTOR TU-RELATED 105 315 - -
Mtr3g2226 315 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 239 314 IPR009001 -
Mtr3g2226 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 107 IPR027417 -
Mtr3g2226 315 Gene3D Translation factors 263 314 - -
Mtr3g2226 315 Gene3D - 52 117 IPR027417 -
Mtr3g2226 315 Gene3D Translation factors 141 262 - -
Mtr3g2226 315 SUPERFAMILY Translation proteins 139 235 IPR009000 -
Mtr3g2226 315 Pfam Elongation factor Tu domain 2 159 229 IPR004161 GO:0005525
Mtr3g2226 315 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 87 102 IPR031157 -
Mtr3g2226 315 CDD EFTU_II 145 233 IPR033720 -
Mtr3g2226 315 Pfam Elongation factor Tu C-terminal domain 251 313 IPR004160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2226 Mtr-Chr3 35899023 35903064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2226 136 246 Eukaryotic Initiation Factors Gene Family AT5G60390 32.174 6.77e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2226 K02358 - rcu:8285868 307.375