Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2224 ATGTCACCAACACCGTCTGCCGGAGTCCACGTTCCTCTCTTGACCGGATCAAATCCGGCGGCGGTTCCTGGTTCAATCCCCGGTGCCGTATTCAATGTCGCCACCAGCATAATTGGCTCCGGAATCATGTCAATTCCGGCGATTCTCAAAGTTCTCGGTGTGCTTCCTTCCTTCGCCTTGATTCTTATTGTTGCCGTGCTCGCCGAAGTTTCTGTTGATTTTCTCATGCGTTTTACACATGCTGGTGTAACCACGACATACTCTGGTGTTATGAAGGAAGCTTTTGGGTCCGTTGGAGCTTTAAGCGCTCAAGTTTGTGTTATAATCACTAACTTTGGGGGTTTAGTTCTCTTCCTAATTATCATTGGGGATGTTTTATCTGGAAAGGAAAGTGGAGGTGAAGTGCACTTGGGACTTTTGCAACAGTGGTTTGGGATTCATTGGTGGAATTCGAGGGAAGTTGCTCTTTTTATCACCTTGGTTCTTGTTATGCTTCCTTTGGTCTTGTACAAGCGTGTAGAATCTTTGAAGTACAGTTCTGGAATATCAACTCTTCTTGCTGTGGCATTTGTTACCATTTGTTCTGGGTTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACTCCTAAATTGGTTCCTCGATTAGACTACCAGACATCATTCTTTGATTTGTTCACTGCAGTACCTGTTGTAGTTACAGCATTCACATTTCATTTCAATGTGCATCCTATTGGGTTTGAGCTTGCGAGTCCATCTCATATGAAAACAGCAGTTCGATTAGCAATAATGTTTTGTGCTGTTGTCTACTTTACAATCGGTCTATTTGGCTACCTTTTGTTTGGAGATTCAACACAATCAGACATTCTAATCAATTTTGATCAGAATGCTGATTCTGCTGTTGGTTCCTTGTTCAATAGTTTAATACGTGTAAGCTACGCACTCCACATTATGTTGGTATTCCCTCTTATAAATTTCTCTTTAAGAGCCAACATCGATGAACTCCTATTCCCTAAGAAGCCTCTGCTAGCCACAGACAACAAGAGATTTGTGATTATCACTCTTGTGCTCTTAGTATTCTCCTATCTTGCTGCTATAGCTATCCCAGATATTTGGTACTTCTTTCAGTTTTTAGGATCAACAACTGCCCTGTCCCTTGCCTTTGTTTTCCCTGGCACTATTGTTTTAAGGGATGCTCTTGGCATATCAACAAGACAGGACAAAATTATAGCACTGGTTATGATTATATTAGCTGTAGTGACAAGTGTAATTGCAATCTCCACCAACATATACAATGCTTTAAGTAGCAAGTCATAA 1317 0.4146 MSPTPSAGVHVPLLTGSNPAAVPGSIPGAVFNVATSIIGSGIMSIPAILKVLGVLPSFALILIVAVLAEVSVDFLMRFTHAGVTTTYSGVMKEAFGSVGALSAQVCVIITNFGGLVLFLIIIGDVLSGKESGGEVHLGLLQQWFGIHWWNSREVALFITLVLVMLPLVLYKRVESLKYSSGISTLLAVAFVTICSGLAIVALVQGKTQTPKLVPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELASPSHMKTAVRLAIMFCAVVYFTIGLFGYLLFGDSTQSDILINFDQNADSAVGSLFNSLIRVSYALHIMLVFPLINFSLRANIDELLFPKKPLLATDNKRFVIITLVLLVFSYLAAIAIPDIWYFFQFLGSTTALSLAFVFPGTIVLRDALGISTRQDKIIALVMIILAVVTSVIAISTNIYNALSSKS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2224 438 PANTHER AMINO ACID TRANSPORTER 5 436 - -
Mtr3g2224 438 Pfam Transmembrane amino acid transporter protein 24 425 IPR013057 -
Mtr3g2224 438 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 5 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2224 Mtr-Chr3 35888121 35890737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2224 4 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 57.407 3.51e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2224 - - gmx:100815694 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2224 3 35888121 35890737 Mtr3g2224 3 35888121 35890737 ECH
Mtr3g2224 3 35888121 35890737 Mtr5g2876 5 37329449 37333393 PCT
Mtr5g2877 5 37336147 37338952 Mtr3g2224 3 35888121 35890737 PCT