Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2212 ATGGAAGGAATGAAAGTTATAGGAAAGAATGTTAAAGGAAAGAAAGGAGGTGTTTTGCTAGGGCCAACATTTTTAGGGCGCAATGAAACATTGTTCAAAACTTTATATCCCTTGAAACAATCTACGTTCTTAACATCATTGGCGAAAATAGGAGCTTCATATTTTGTGTTCATCTATGCATTGAAATTGGATGTAACAATGACCTTAAAAGCAGCCAAACGTTGTTGGAGGTTTGGTGTGATTCCCTTTTTGGCATCTTTTATTTCTACATCAATTCTCTTGAAAATGTATACACCAAATGGTTCTAGTAAAACAGGCTCAGCATATTCCATTCCAAACGTCTTCACAGTTACTAGTTTTGCCGTTGTTTCTCAAGCTTTGACAGAACTCAACCTTATGAGTACGGAGCTAGGGCAAATTGCTTTATCTTCAGCAATGATCACTGAAATGATGCAATGGGTTACGATAACACTACAAATACAAGTCAAAACTATGAAGTTTAAAAATATCTTTTTTGCGTTCATTGCCTTGGGTTTATGTGTCTTATATATTTTATCCTTCTTTTTCATTGTAAGACCAATGGCAAGGTTTATCATTCAAAGAACACCAATTGGAAAACCTTTGAAAGAAATCTATGTTGTCTTTGTTCTTTTGGGTGTTCTAATTATGGTAGCTATTAGCGACGCGCTTGGTTTACATTTTGTTATAGGACCTATTCTTTTTGGTTTGGCAATGCCTAATGGACCTCCCTTGGCAACAACAATAGTAGAGAAAAGTGAACTAATCGTCCAAGAATTGCTTATGCCATTTTTCTTCTCATACATTGGCATAACAACAAATTTAAAAGGAATTGCCAAAAATTGGAAGGTGGTATTTGTATTTCAGAGTATCTTATTTGTTGGGTTCTTGGCAAAGGTTATTAATAATGAAGTATACAGCCAGATGGTTCTATATGTGGTGGTGATGACCGGGATATGCATACCTTTGATAAAAAACATGTATAAGCATGGCTCTCGCGTGACAATGGTAAGAAGTATACATGACGGGGGAGTGAGGACGATCCAAAACACTCCTGAAAATTCAGAGTTCAACATTATTTGTTGCATGCACAATGATAACAACGTGCATAGCATGATCGGTTTGTTAGAGGTTTGTAACCCAACACAAAAAAGCCCTTTATGCGTCCATGTCATTCATCTCACAGAGTTATTAGGAAAAAGCACACCAATTCTTCTTCCTATAAAGATGAAAAACCAAAAAGCCTTGTCCATCCATTACCCTACCAGCAGTCACATTTTACGTGCTTTTGAGAATTACTCCAAAAATTCCGAAGGTCCCGTCACAATTCATTCATATATTAATGTTTCCCCTTACAATAGCATGCATGAAGCCATTTGTAACCTCGCCGAAGATAAATTAGTTCCTTTGCTCATCATTCCATTTCATGAAAATGATAAAAGTACGAGTAGTGACATTGTTATAACTTCAATTCGTGACCTCAGCATTAATTTTCAAGCTCGTGCTCAATGTACAGTGGGAATATTAGTGGATAGAAATTCGCGAATAAGTATGAGTACAACTAAATTGTCGTTTAATGTTGCGATTTTCTTCATTGGTGGACAAGACGATAGAGAAGCATTGGCATTGGGTATTAGAATGTTGGACCGTCCAAATACGAGTGTCACATTATTTTGTTTCATCGTTCATAACAATGAAAACAATATTAATAATTCAGGTGATGTTAAATTTAAAATTGATGATGGTGAAGAAGAAGATGAAACATTAGAGAATATGTTGGATGAGAGTTTGATAGATGAGTTTAAGGGTAAGAAATTAAATATTGATAATGTTGTTTGTCATGAAATTGTGGTGGAGGGCTATACACAGTTGTTAGAAGCACTTCGAGGTTTAGGTAATGAAAACTATGATCTTGTGATGGTGGGTAAGAGGCATAATATTGGAGATTTGACTGATGAAGAAATGACAAATTTTATGGAAAATGCAAATTTGTTGGGTGTTTTTGGAGAAATGTTGTCATCTACTGAATTTTGTAATGGGAAAGTTCCTATATTGGTGTTACAATGTGGTGAGAAAAAGGTAAACCATTTTGGGAAGTTATCCTCTCTCGTTAATGATGGGTCACATAGAAAAAAACTCTCACTTAATGCATTATTTTAG 2178 0.354 MEGMKVIGKNVKGKKGGVLLGPTFLGRNETLFKTLYPLKQSTFLTSLAKIGASYFVFIYALKLDVTMTLKAAKRCWRFGVIPFLASFISTSILLKMYTPNGSSKTGSAYSIPNVFTVTSFAVVSQALTELNLMSTELGQIALSSAMITEMMQWVTITLQIQVKTMKFKNIFFAFIALGLCVLYILSFFFIVRPMARFIIQRTPIGKPLKEIYVVFVLLGVLIMVAISDALGLHFVIGPILFGLAMPNGPPLATTIVEKSELIVQELLMPFFFSYIGITTNLKGIAKNWKVVFVFQSILFVGFLAKVINNEVYSQMVLYVVVMTGICIPLIKNMYKHGSRVTMVRSIHDGGVRTIQNTPENSEFNIICCMHNDNNVHSMIGLLEVCNPTQKSPLCVHVIHLTELLGKSTPILLPIKMKNQKALSIHYPTSSHILRAFENYSKNSEGPVTIHSYINVSPYNSMHEAICNLAEDKLVPLLIIPFHENDKSTSSDIVITSIRDLSINFQARAQCTVGILVDRNSRISMSTTKLSFNVAIFFIGGQDDREALALGIRMLDRPNTSVTLFCFIVHNNENNINNSGDVKFKIDDGEEEDETLENMLDESLIDEFKGKKLNIDNVVCHEIVVEGYTQLLEALRGLGNENYDLVMVGKRHNIGDLTDEEMTNFMENANLLGVFGEMLSSTEFCNGKVPILVLQCGEKKVNHFGKLSSLVNDGSHRKKLSLNALF* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2212 725 Pfam Sodium/hydrogen exchanger family 17 308 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g2212 725 Gene3D - 15 342 IPR038770 -
Mtr3g2212 725 PANTHER CATION/H+ EXCHANGER 3 305 701 - -
Mtr3g2212 725 PANTHER CATION/H+ EXCHANGER 3 15 307 - -
Mtr3g2212 725 PANTHER CATION/H + ANTIPORTER 15 307 - -
Mtr3g2212 725 PANTHER CATION/H + ANTIPORTER 305 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2212 Mtr-Chr3 35756646 35762267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2212 16 694 Antiporter Super Family AT2G13620 30.926 4.82e-111 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2212 - - mtr:MTR_3g071880 1363.98