Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2197 ATGAGAAAGTGGAAATTCAGTCTCTTTCTATGGCTTGCATCGTTTTGTTTTTTGTCACAGTGTTTTGGTTTGTGTTGTTCTTTGAATGATGAAGGTAAAGCACTTTTGAAGTTCAAGGAGGGAATTTTCAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAAGTTGGAGTTGATCCTTGTAATTGGTTTGGAGTTGAGTGTTTAGATGGAAGAGTGGTTGTATTGAATTTGAAAAACCTTTGTCTTGAAGGAAATCTAGCACATGAGCTCGGAAGCCTTGTTCACATAAAGTCCATAGTTCTGCGGAATAATTCTTTTTATGGGATCATTCCTGAAGGAATTGTACGATTGAAGGAATTGGAGGTTTTGGATTTAGGCTACAACAATTTCAGTGGACCTCTACCTAAAGATATTGGGAGTAATATCTCACTAGCAATCCTTTTGCTGGACAATAATGATCTTCTTTGCGGTTTCTCTCATGAAATTAATGAATTGGTGTTGATTTCTGAATCTCAAGTAGATGAAAAGCAGCTAATTAGTGCAAGAAAATTGCCAGGTTGTACAGGAAGATCTACCAAATGGCATAATCGTCGAAGTAAAAAAGGTCTTCGGAGGCTACTGCAATCCGGTGCTCCTCGTGAAGATCCTCGTAATCGTGCAGCTATTATTCCTGATACTCCATCTCCATCTCCATCTCCTTCACCTTTCCCATCTCCGTCTCCTTCACCTTCCCCGTCTTCCTCAGAAACACCACAAATAGTGAAGAAGCCAGCTTCGCCAGATCGAAATGTTTCTGATTCTCCTTCTCCCTTGCCTACACCAGGCTCTGTACCACAACTCAAAAGTAACTCAAACAATCATCACGTTGCTATTGTGGGTGGAATTGTGGGTGGTGCGGCATTTATTCTCATTTTAAGCATTGTCATATATCTCTTTAAAACCAACAAGGTAGCCACCGTTAAACCATGGGCTACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGCGAAGATTTTAGTAATGTAATTGGCACTTCACCCATTGGTAATATATACAAAGGGACTCTATCTAGCGGTGTTGAAATAGCCGTGGCCTCTGTTACAGTGACATCATTGAAAGATTGGTCAAAGACTTCAGAAGTCCAATTCCGTAAGAAGATAGATACATTATCAAAGATGAACCACAAGAATTTCGTAAATCTTCTTGGATTTTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAACATTTACATGTAAAAGAAGCTGAGCATTTAGATTGGGCAACAAGACTTAGAGTTGCAATTGGCACAGCTTACTGCCTGCAACATATGCACCAGTTGGACCCTCCTTTCGCACATAGCGACCTAAATACTTCATCTGTCCAACTCACTGACGACTACGCTGCCAAAATCTCAGACTTGAGTTTCTTGAATGAAATAGCTTCAGCCGATATAAAAGCTGCTGCTAAGAAACACACTGACGCGACATTAGCAAGTAACATTTACAGTTTCGGCATTATATTACTCGAAATTGTAACAGGCCGTGTTCCTTATTCGATGGGTAAAGATGACTCACTTGAAGAGTGGGCTTCACGCTATTTACAAGGGGACCAGCCTCTCAAAGAAATAGTGGATCCAACACTAGCATCTTTCCAAGAAGAACAGCTAGTACAAATCGGTGCGTTGATTAAGTCTTGTGTCAATGCTGATCAAGAGCAAAGACCAACAATGAAACAAATTTGTGAGAGATTAAGAGAGATAACAAAAATAAGTCCTGAAGTAGCTGTTCCTAAACTTTCGCCACTTTGGTGGGCAGAACTTGAGATTGCTTCCTTTGACGCCAGCTAA 1938 0.4076 MRKWKFSLFLWLASFCFLSQCFGLCCSLNDEGKALLKFKEGIFSDPFDALSNWVDDEVGVDPCNWFGVECLDGRVVVLNLKNLCLEGNLAHELGSLVHIKSIVLRNNSFYGIIPEGIVRLKELEVLDLGYNNFSGPLPKDIGSNISLAILLLDNNDLLCGFSHEINELVLISESQVDEKQLISARKLPGCTGRSTKWHNRRSKKGLRRLLQSGAPREDPRNRAAIIPDTPSPSPSPSPFPSPSPSPSPSSSETPQIVKKPASPDRNVSDSPSPLPTPGSVPQLKSNSNNHHVAIVGGIVGGAAFILILSIVIYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGNIYKGTLSSGVEIAVASVTVTSLKDWSKTSEVQFRKKIDTLSKMNHKNFVNLLGFCEEDEPFTRMVVFEYAPNGTLFEHLHVKEAEHLDWATRLRVAIGTAYCLQHMHQLDPPFAHSDLNTSSVQLTDDYAAKISDLSFLNEIASADIKAAAKKHTDATLASNIYSFGIILLEIVTGRVPYSMGKDDSLEEWASRYLQGDQPLKEIVDPTLASFQEEQLVQIGALIKSCVNADQEQRPTMKQICERLREITKISPEVAVPKLSPLWWAELEIASFDAS* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2197 645 SUPERFAMILY Protein kinase-like (PK-like) 338 614 IPR011009 -
Mtr3g2197 645 Pfam Protein tyrosine and serine/threonine kinase 358 614 IPR001245 GO:0004672|GO:0006468
Mtr3g2197 645 MobiDBLite consensus disorder prediction 265 285 - -
Mtr3g2197 645 ProSiteProfiles Protein kinase domain profile. 355 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2197 645 Gene3D Phosphorylase Kinase; domain 1 327 437 - -
Mtr3g2197 645 SUPERFAMILY L domain-like 26 161 - -
Mtr3g2197 645 Gene3D Transferase(Phosphotransferase) domain 1 438 625 - -
Mtr3g2197 645 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Mtr3g2197 645 Gene3D Ribonuclease Inhibitor 27 204 IPR032675 -
Mtr3g2197 645 MobiDBLite consensus disorder prediction 187 285 - -
Mtr3g2197 645 MobiDBLite consensus disorder prediction 229 249 - -
Mtr3g2197 645 PANTHER BNAA09G55080D PROTEIN 4 645 - -
Mtr3g2197 645 PANTHER PROTEIN MALE DISCOVERER 2 4 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2197 Mtr-Chr3 35559488 35563440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2197 8 618 Receptor kinase-like Gene Family AT1G66830 25.806 1.31e-45 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mtr3g2197 PK_Tyr_Ser-Thr 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2197 - - gmx:100784541 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2197 3 35559488 35563440 Mtr3g2197 3 35559488 35563440 ECH