Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2192 ATGAAAGGCATAAAGGGTTATGAGCCACGTTCAAGCTCATCTTGTGCAGCTTGCAAATTATTGAAAAGAAGATGCACACCAGATTGCTTATTTGCACCTTACTTCCATTCTAATGAGTGCAAGAAATTCGCCAAAGTTCACAAAGTATTTGGAGCAAGCAATGTTAGCAAGATACTCATTGAAGTGCCAGAAAAACAAAGAGAAGACACAGTGAATTCTCTTGCTTATGAAGCTGAAGCAAGGCTTAGAGACCCAGTTTACGGATGCATTGGTTCCATAGCTATGTTGCAAAGGAAGATGATGGAACTTCAGCATGATTTGGCCATTGCTAAGGAACGTCTTGCTCGTTGTCGCGCAGTTGCTGCAGCTGCTACAATCACCACCACAACAGCTCCTTCTGTGATTGATAGTTTGCATTCGGATGTTACTTTGCCTCCATTTCCTGAGTTTTCCACTTCTGATGATCTCAATGATATCTTTTGTCATGGCTCTTCTTCACAATTTTTGGGTCGAAATGAAACAGTGGATGATTTCAATCAAATTCCATATATATTTTGA 558 0.4032 MKGIKGYEPRSSSSCAACKLLKRRCTPDCLFAPYFHSNECKKFAKVHKVFGASNVSKILIEVPEKQREDTVNSLAYEAEARLRDPVYGCIGSIAMLQRKMMELQHDLAIAKERLARCRAVAAAATITTTTAPSVIDSLHSDVTLPPFPEFSTSDDLNDIFCHGSSSQFLGRNETVDDFNQIPYIF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2192 185 Coils Coil 93 113 - -
Mtr3g2192 185 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Mtr3g2192 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 180 - -
Mtr3g2192 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 4 180 - -
Mtr3g2192 185 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2192 Mtr-Chr3 35529355 35530093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2192 4 114 AS2 family AT3G11090 77.477 2.33e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr3g2192 LOB 3.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2192 - - cam:101504923 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2192 3 35529355 35530093 Mtr3g2192 3 35529355 35530093 ECH