Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2185 ATGGCTGAAATACTTGGGTCATTCCTCTCTTCCTTGTTACCATCAAAGGTGGATAGGATATCCGTTCAAGACTTTAAAGATTTCTTTAAGGGCAACGGTATTGATGAGGGGCATCTCCAAGACTTAAGACTGCTTTTATTATCCGTCGCTACTGTGCTCAATGATGCTGAGGAGAAGCAATTTATTGAACCATGGGTGAAAGAGTGGACTGATAAAGTTAAGGATGTTGCATATGATGCCGATGACTTAATGGATGAGCTAGTCACCAAGGAAATGTATTCAAGGGATTTTGCTTCGTCTCTCAATCCATTTGCTGAACAACCACAATCTAGAGTTCTAGAGATTCTTGAGAGGTTAAGATCCTTAGTAGAGCTCAAAGACATTCTCATTATTAAGGAAGGTAGTGCAAGTAAATTACCCTCATTTACTTCAGAAACAACTTCTTTGGTAGATGAACGTCGAGTGTACGGTAGAAATGTTGATAAGGAGAAAATTATCGAGTTTTTGTTATCCAACAACTCCCAAGATGTGGAAGTGCCTGTAGTTGCTATTGTTGGGATGGCAGGGGTTGGCAAGACCACTCTTGCTCAGATATTATACAATGATTCACGAGTTATGGACCATTTTCAGTCAAGATCGTGGGCATCCGTTTCAGGAAATTCGAAAATGCAGGAAATAACTAAACAAGTTCTAGATTCATTCACTTTGTGTCAATCTGATGTCGTGGACTTCAATGGTCTCCAAATTCGGCTAAAAAAAGAATTAACAGGGAAAAGGTTTTTACTTGTTTTGGATGGGTTCGAGAATGAGAATTATCTTGATTGGGATATCCTTCAAATGCCTTTTGTTTCAGAAAATAATGGAAGTAGAATAATTGCTACCACACGTAATAAAAGGGTTGCCACAGCAATCCGTGCTAATCTAACTCATTTCCCCCCGTTCCTATCTCAAGAGGCTTCATGGGAGTTATTCTCAAGTCATGCATTCAAGTCTCAAAACTCAAATGAACGAAGTCGTGTTTTGACGGAAATTGGTAAAAAAATCGTTCAAAGGTGTGGTGGTCTCCCCCTAGCCACAATTACACTAGGGAGTCTCTTAAATTCAAAAGAGGACAGTGAGGAGTGGGAAAATGTTTGTACCAGTAAATTATGGGATTTATCAAGAGGGGGGAACAACATATTTTCTGCATTAATTTCAAGCTACATACGCCTGCCTCCATATCTCAAGCGGTGCTTTTCATTTTGTGCCATCTTTCCGAAAGGCCATAAAATAGAAAAAGGGAACTTGATATATTTATGGATGGCTGAAGGTCTTTTGCCACGATCAACAATGGGAAAGAGAGCAGAAGATATAGGAGAAGAATGTTTTGAGGAGTTGGTGTCGAAGACGTTCTTTCACCACACATCGGATGATTTTTTAATGCATAACATTATGCATGAGTTAGCAGAATGTGTTGCAGGTGAATTTTGTTACAGGTTGATGGATAGTGATCCAAGCACAATTGGAGTGAGTAGAGTGCGCCGTATCTCATATTTTCAAGGAACATACGATGACTCTGAACATTTTGATATGTACGCTGATTTCGAGAAGTTGAGGACCTTCATGCCTTTTAAATTCTACCCCGTTGTTCCTTCGTTGGGTGGAATTTCCGCTTCAGTTTCAACTCTATTAAAAAAACCAAAGCCTCTGCGTGTCTTCTCTTTGTCTGAATATCCGATTACCTTATTGCCTAGTTCAATTGGTCATTTATTGCATTTGCGGTATTTGGATCTTTCTCGGACTCCAATTACTTCTCTTCCTGATTCTATCTGCAATCTGTATAACTTAGAAGCATTATTGCTGGTGGGTTGTGCTGATCTTACTTTGTTACCAACAAAAACATCCAAGCTTATCAACCTACGACAATTGGATATTAGTGGCAGTGGTATAAAAAAGATGCCTACAAATCTTGGCAAGTTAAAGTCTCTTCAATCGTTGCCTCGTTTTGTCGTTAGCAATGATGGGGGATCAAATGTTGGTGAATTGGGGGAGATGTTGGAACTTCGTGGCTCACTTTCCATTGTGAACTTGGAAAATGTTCTGCTTAAAGAAGAAGCATCCAATGCTGGGTTGAAGCGTAAAAAATATCTTCATGAGGTCGAATTCAAGTGGACAACTCCAACACACAGTCAAGAGAGCGAAAATATTATATTTGACATGCTAGAGCCGCATCGAAACTTGAAAAGACTTAAAATAAATAATTTTGGTGGTGAGAAGTTTCCAAATTGGCTAGGGAGCAATTCAGGTTCTACTATGATGTCTCTATATCTTGACGAGTGCGGAAATTGTTTGTCATTGCCATCACTTGGACAATTGTCTAATCTGAGAGAAATTTACATAACTTCTGTTACAAGGTTGCAAAAGGTGGGTCCGGAATTTTATGGGAATGGATTTGAGGCATTTAGTTCCTTAAGAATCATCAAGTTTAAGGACATGCTCAATTGGGAAGAATGGTCAGTCAATAATCAAAGTGGAAGTGAGGGTTTCACTTTGCTTCAAGAGCTTTACATAGAAAATTGTCCTAAACTGATTGGTAAGTTACCCGGCAACCTTCCTTCCTTGGATAAGTTAGTGATCACTTCATGTCAAACTTTAAGTGATACCATGCCATGTGTCCCAAGATTAAGAGAATTGAAGATCAGCGGTTGTGAAGCATTTGTTTCCTTATCCGAGCAAATGATGAAATGCAATGATTGTCTTCAAACAATGGCCATCAGTAACTGCCCATCTTTGGTCAGCATCCCTATGGATTGCGTCTCAGGGACGCTTAAATCTCTTAAAGTATCTGATTGTCAGAAATTACAACTAGAAGAGTCTCACTCCTATCCTGTCCTTGAGAGTTTAATCTTAAGAAGTTGCGATTCTCTCGTATCTTTTCAATTGGCTTTATTTCCAAAGCTTGAAGATCTTTGCATAGAAGATTGTAGCAGTCTCCAGACCATTTTATCTACTGCAAACAATCTTCCATTTCTTCAAAACTTGAACTTGAAAAATTGCTCAAAACTGGCTCCGTTTTCTGAGGGAGAGTTTTCTACAATGACATCACTTAATTCTCTTCATCTTGAGAGTCTTCCTACACTCACTTCACTAAAGGGCATCGGAATCGAACACTTAACCTCTCTTAAAAAGCTGGAGATAGAGGATTGTGGTAACCTTGCCTCTCTACCAATAGTCGCCTCCCTTTTCCATCTAACTGTCAAAGGATGCCCGTTATTGAAATCGCATTTTGAAAGGGTCACCGGAGAATACTCGGACATGGTGTCTTCCATACCCTCTACTATTATTGAAGCTTAG 3333 0.3939 MAEILGSFLSSLLPSKVDRISVQDFKDFFKGNGIDEGHLQDLRLLLLSVATVLNDAEEKQFIEPWVKEWTDKVKDVAYDADDLMDELVTKEMYSRDFASSLNPFAEQPQSRVLEILERLRSLVELKDILIIKEGSASKLPSFTSETTSLVDERRVYGRNVDKEKIIEFLLSNNSQDVEVPVVAIVGMAGVGKTTLAQILYNDSRVMDHFQSRSWASVSGNSKMQEITKQVLDSFTLCQSDVVDFNGLQIRLKKELTGKRFLLVLDGFENENYLDWDILQMPFVSENNGSRIIATTRNKRVATAIRANLTHFPPFLSQEASWELFSSHAFKSQNSNERSRVLTEIGKKIVQRCGGLPLATITLGSLLNSKEDSEEWENVCTSKLWDLSRGGNNIFSALISSYIRLPPYLKRCFSFCAIFPKGHKIEKGNLIYLWMAEGLLPRSTMGKRAEDIGEECFEELVSKTFFHHTSDDFLMHNIMHELAECVAGEFCYRLMDSDPSTIGVSRVRRISYFQGTYDDSEHFDMYADFEKLRTFMPFKFYPVVPSLGGISASVSTLLKKPKPLRVFSLSEYPITLLPSSIGHLLHLRYLDLSRTPITSLPDSICNLYNLEALLLVGCADLTLLPTKTSKLINLRQLDISGSGIKKMPTNLGKLKSLQSLPRFVVSNDGGSNVGELGEMLELRGSLSIVNLENVLLKEEASNAGLKRKKYLHEVEFKWTTPTHSQESENIIFDMLEPHRNLKRLKINNFGGEKFPNWLGSNSGSTMMSLYLDECGNCLSLPSLGQLSNLREIYITSVTRLQKVGPEFYGNGFEAFSSLRIIKFKDMLNWEEWSVNNQSGSEGFTLLQELYIENCPKLIGKLPGNLPSLDKLVITSCQTLSDTMPCVPRLRELKISGCEAFVSLSEQMMKCNDCLQTMAISNCPSLVSIPMDCVSGTLKSLKVSDCQKLQLEESHSYPVLESLILRSCDSLVSFQLALFPKLEDLCIEDCSSLQTILSTANNLPFLQNLNLKNCSKLAPFSEGEFSTMTSLNSLHLESLPTLTSLKGIGIEHLTSLKKLEIEDCGNLASLPIVASLFHLTVKGCPLLKSHFERVTGEYSDMVSSIPSTIIEA* 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2185 1110 PANTHER DISEASE RESISTANCE PROTEIN RP 35 931 IPR044974 GO:0006952
Mtr3g2185 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 415 IPR027417 -
Mtr3g2185 1110 SMART LRR_typ_2 583 606 IPR003591 -
Mtr3g2185 1110 SMART LRR_typ_2 630 653 IPR003591 -
Mtr3g2185 1110 Pfam NB-ARC domain 161 380 IPR002182 GO:0043531
Mtr3g2185 1110 Gene3D Ribonuclease Inhibitor 1020 1095 IPR032675 -
Mtr3g2185 1110 Gene3D Ribonuclease Inhibitor 933 1019 IPR032675 -
Mtr3g2185 1110 PANTHER OS05G0414200 PROTEIN 35 931 - -
Mtr3g2185 1110 SUPERFAMILY L domain-like 474 876 - -
Mtr3g2185 1110 Pfam Rx N-terminal domain 36 95 IPR041118 -
Mtr3g2185 1110 Gene3D - 400 484 IPR036388 -
Mtr3g2185 1110 Gene3D - 141 310 IPR027417 -
Mtr3g2185 1110 Gene3D - 314 399 IPR042197 -
Mtr3g2185 1110 Coils Coil 687 707 - -
Mtr3g2185 1110 PRINTS Disease resistance protein signature 181 196 - -
Mtr3g2185 1110 PRINTS Disease resistance protein signature 254 268 - -
Mtr3g2185 1110 PRINTS Disease resistance protein signature 352 366 - -
Mtr3g2185 1110 PRINTS Disease resistance protein signature 999 1015 - -
Mtr3g2185 1110 Gene3D Ribonuclease Inhibitor 547 924 IPR032675 -
Mtr3g2185 1110 ProSiteProfiles Leucine-rich repeat profile. 585 606 IPR001611 GO:0005515
Mtr3g2185 1110 Gene3D - 30 124 - -
Mtr3g2185 1110 SUPERFAMILY RNI-like 842 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2185 Mtr-Chr3 35416859 35425930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2185 155 696 WRKY Transcription Factor Family AT5G45050 23.263 2.15e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2185 - - mtr:MTR_3g070590 2045.01