Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2183 ATGGACCATTTTCAGTCAAGATCGTGGGCATCCGTTTCAGGAAATTCGAAAATGCAGGAAATAACTAAACAAGTTCTAGATTCATTCACTTTGTGTCAATCTGATGTCGTGGACTTCAATGGTCTCCAAATTCGGCTAAAAAAAGAATTAACAGGGAAAAGGTTTTTACTTGTTTTGGATGGGTTCGAGAATGAGAATTATCTTGATTGGGATATCCTTCAAATGCCTTTTGTTTCAGAAAATAATGGAAGTAGAATAATTGCTACCACACGTAATAAAAGGGTTGCCACAGCAATCCGTGCTAATCTAACTCATTTCCCCCCGTTCCTATCTCAAGAGGCTTCATGGGAGTTATTCTCAAGTCATGCATTCAAGTCTCAAAACTCAAATGAACGAAGTCGTGTTTTGACGGAAATTGGTAAAAAAATCGTTCAAAGGTGTGGTGGTCTCCCCCTAGCCACAATTACACTAGGGAGTCTCTTAAATTCAAAAGAGGACAGTGAGGAGTGGGAAAATGTTTGTACCAGTAAATTATGGGATTTATCAAGAGGGGGGAACAACATATTTTCTGCATTAATTTCAAGCTACATACGCCTGCCTCCATATCTCAAGCGGTGCTTTTCATTTTGTGCCATCTTTCCGAAAGGCCATAAAATAGAAAAAGGGAACTTGATATATTTATGGATGGCTGAAGGTCTTTTGCCACGATCAACAATGGGAAAGAGAGCAGAAGATATAGGAGAAGAATGTTTTGAGGAGTTGGTGTCGAAGACGTTCTTTCACCACACATCGGATGATTTTTTAATGCATAACATTATGCATGAGTTAGCAGAATGTGTTGCAGGTGAATTTTGTTACAGGTTGATGGATAGTGATCCAAGCACAATTGGAGTGAGTAGAGTGCGCCGTATCTCATATTTTCAAGGAACATACGATGACTCTGAACATTTTGATATGTACGCTGATTTCGAGAAGTTGAGGACCTTCATGCCTTTTAAATTCTACCCCGTTGTTCCTTCGTTGGGTGGAATTTCCGCTTCAGTTTCAACTCTATTAAAAAAACCAAAGCCTCTGCGTGTCTTCTCTTTGTCTGAATATCCGATTACCTTATTGCCTAGTTCAATTGGTCATTTATTGCATTTGCGGTATTTGGATCTTTCTCGGACTCCAATTACTTCTCTTCCTGATTCTATCTGCAATCTGTATAACTTAGAAGCATTATTGCTGGTGGGTTGTGCTGATCTTACTTTGTTACCAACAAAAACATCCAAGCTTATCAACCTACGACAATTGGATATTAGTGGCAGTGGTATAAAAAAGATGCCTACAAATCTTGGCAAGTTAAAGTCTCTTCAATCGTTGCCTCGTTTTGTCGTTAGCAATGATGGGGGATCAAATGTTGGTGAATTGGGGGAGATGTTGGAACTTCGTGGCTCACTTTCCATTGTGAACTTGGAAAATGTTCTGCTTAAAGAAGAAGCATCCAATGCTGGGTTGAAGCGTAAAAAATATCTTCATGAGGTCGAATTCAAGTGGACAACTCCAACACACAGTCAAGAGAGCGAAAATATTATATTTGACATGCTAGAGCCGCATCGAAACTTGAAAAGACTTAAAATAAATAATTTTGGTGGTGAGAAGTTTCCAAATTGGCTAGGGAGCAATTCAGGTTCTACTATGATGTCTCTATATCTTGACGAGTGCGGAAATTGTTTGTCATTGCCATCACTTGGACAATTGTCTAATCTGAGAGAAATTTACATAACTTCTGTTACAAGGTTGCAAAAGGTGGGTCCGGAATTTTATGGGAATGGATTTGAGGCATTTAGTTCCTTAAGAATCATCAAGTTTAAGGACATGCTCAATTGGGAAGAATGGTCAGTCAATAATCAAAGTGGAAGTGAGGGTTTCACTTTGCTTCAAGAGCTTTACATAGAAAATTGTCCTAAACTGATTGGTAAGTTACCCGGCAACCTTCCTTCCTTGGATAAGTTAGTGATCACTTCATGTCAAACTTTAAGTGATACCATGCCATGTGTCCCAAGATTAAGAGAATTGAAGATCAGCGGTTGTGAAGCATTTGTTTCCTTATCCGAGCAAATGATGAAATGCAATGATTGTCTTCAAACAATGGCCATCAGTAACTGCCCATCTTTGGTCAGCATCCCTATGGATTGCGTCTCAGGGACGCTTAAATCTCTTAAAGTATCTTATTGTCAGAAATTACAACGAGAAGAGTCTCACTCCTATCCTGTCCTTGAGAGTTTAATCTTAAGAAGTTGCGATTCTCTCGTATCTTTTCAATTGGCTTTATTTCCAAAGCTTGAAGATCTTTGCATAGAAGATTGTAGCAATCTCCAGACCATTTTATCTACTGCAAACAATCTTCCATTTCTTCAAAACTTGAACTTGAAAAATTGCTCAAAACTGGCTCTGTTTTCTGAGGGAGAGTTTTCTACAATGACATCACTTAATTCTCTTCATCTCGAGAGTCTTCCTACACTCACTTCACTAAAGGGCATCGGAATCGAACACTTAACCTCTCTTAAAAAGCTGAAGATAGAGGATTGTGGTAACCTTGCCTCTCTACCAATAGTCGCCTCCCTTTTCCATCTAACTGTCAAAGGATGCCCGTTATTGAAATCGCATTTTGAAAGGGTCACCGGAGAATACTCGGACATGGTGTCTTCCATACCCTCTACTATTATTGAAGCTTAG 2718 0.3918 MDHFQSRSWASVSGNSKMQEITKQVLDSFTLCQSDVVDFNGLQIRLKKELTGKRFLLVLDGFENENYLDWDILQMPFVSENNGSRIIATTRNKRVATAIRANLTHFPPFLSQEASWELFSSHAFKSQNSNERSRVLTEIGKKIVQRCGGLPLATITLGSLLNSKEDSEEWENVCTSKLWDLSRGGNNIFSALISSYIRLPPYLKRCFSFCAIFPKGHKIEKGNLIYLWMAEGLLPRSTMGKRAEDIGEECFEELVSKTFFHHTSDDFLMHNIMHELAECVAGEFCYRLMDSDPSTIGVSRVRRISYFQGTYDDSEHFDMYADFEKLRTFMPFKFYPVVPSLGGISASVSTLLKKPKPLRVFSLSEYPITLLPSSIGHLLHLRYLDLSRTPITSLPDSICNLYNLEALLLVGCADLTLLPTKTSKLINLRQLDISGSGIKKMPTNLGKLKSLQSLPRFVVSNDGGSNVGELGEMLELRGSLSIVNLENVLLKEEASNAGLKRKKYLHEVEFKWTTPTHSQESENIIFDMLEPHRNLKRLKINNFGGEKFPNWLGSNSGSTMMSLYLDECGNCLSLPSLGQLSNLREIYITSVTRLQKVGPEFYGNGFEAFSSLRIIKFKDMLNWEEWSVNNQSGSEGFTLLQELYIENCPKLIGKLPGNLPSLDKLVITSCQTLSDTMPCVPRLRELKISGCEAFVSLSEQMMKCNDCLQTMAISNCPSLVSIPMDCVSGTLKSLKVSYCQKLQREESHSYPVLESLILRSCDSLVSFQLALFPKLEDLCIEDCSNLQTILSTANNLPFLQNLNLKNCSKLALFSEGEFSTMTSLNSLHLESLPTLTSLKGIGIEHLTSLKKLKIEDCGNLASLPIVASLFHLTVKGCPLLKSHFERVTGEYSDMVSSIPSTIIEA* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2183 905 Gene3D - 109 194 IPR042197 -
Mtr3g2183 905 Gene3D Ribonuclease Inhibitor 726 813 IPR032675 -
Mtr3g2183 905 Gene3D Ribonuclease Inhibitor 814 893 IPR032675 -
Mtr3g2183 905 PANTHER DISEASE RESISTANCE PROTEIN RP 7 723 IPR044974 GO:0006952
Mtr3g2183 905 SUPERFAMILY L domain-like 269 671 - -
Mtr3g2183 905 Gene3D - 195 279 IPR036388 -
Mtr3g2183 905 PANTHER OS05G0414200 PROTEIN 7 723 - -
Mtr3g2183 905 Gene3D - 1 105 IPR027417 -
Mtr3g2183 905 SMART LRR_typ_2 378 401 IPR003591 -
Mtr3g2183 905 SMART LRR_typ_2 425 448 IPR003591 -
Mtr3g2183 905 Gene3D Ribonuclease Inhibitor 341 719 IPR032675 -
Mtr3g2183 905 Coils Coil 482 502 - -
Mtr3g2183 905 SUPERFAMILY RNI-like 637 880 - -
Mtr3g2183 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 210 IPR027417 -
Mtr3g2183 905 Pfam NB-ARC domain 3 175 IPR002182 GO:0043531
Mtr3g2183 905 PRINTS Disease resistance protein signature 49 63 - -
Mtr3g2183 905 PRINTS Disease resistance protein signature 147 161 - -
Mtr3g2183 905 PRINTS Disease resistance protein signature 794 810 - -
Mtr3g2183 905 ProSiteProfiles Leucine-rich repeat profile. 380 401 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2183 Mtr-Chr3 35398902 35405158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2183 46 491 WRKY Transcription Factor Family AT5G45050 23.541 6.68e-08 54.7