Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2169 ATGAAGAATCTCATCACCCACCTCATCTTCGTCACCGCCATAATCATATTCTATCTTTCACCCTCTGCCCATACTTTAGGCTCCGGCACTACCCTCTCTGTCACAGACTCCCCTGCCACCGTATGCGGGATCATATCAGGCGAAACAACACAGCACATTCAGTGTTACCGTGAAGGAGAAGTTTTCAACATCCTTCCAAACGTTTCATTTTCTTCAATCTCTGGTGGAAGAAGCTACTTCTGTGGCTTAAGGTCTGGTAACTACAGTTTACATTGTTGGGATAGTTCTTCGTTTCAAACTAAAAGACTTTACTCTAATGACTCTTTTTTATTAGAGAATCTCTCTGTTGGAGATTTTCAAGTTTGTGCTACTGTGGTTGGTGTTGGAACAGTGCGATGTTGGAGAACATTTGATGGATTTGAGCCATCTGGGTTGGATCATTTCGGTTCGATTTCATCTGGTTCGAATTTTTCTTGTGGGATTTTGAAAACTGGTTTACAAGTTCGGTGTTGGGGTGAAAAAACCGTTGCTGAAAGGTTACAGAACGAGTTTCGGAACATGTCTATGTTGAGTATTGTAGCTGGTGGTTCAAATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGCAAAGGAAGTAACAGTTCTGGTCAACTTGATGTTCCACAAGGTGGTGCTTTTGAGTATGGTGATATAGCACTTGGTGATGAACATGGTTGTGCTGTTCGAAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGAAAAGGAGAATTTTCTGCGGATTCTATTGAAGGGGTTTCTTTTGAGTTAATTGTTTCTGGTTCTAATTTTACTTGTGGTTTGACAACAACCAATTTTTCTGTTGTTTGTTGGGGACCTGGTTGGTCTAATGGATCAAATGGTTCTGAATCTATTCTTCCTTTGTCTCGGATTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTGATTCACAATCATTATGTTCTAACTTTGGTCACATTTGCAACCCAAATATATGTAACACTCAAATAACAAGCCCGCCGCCGCCTCCACCAGCACCTTCTCCTCCTCGATCTTCTCGATCGAAGACTTTGACAACCGGATTATTGGTTTTTGCAATTGTTGGATCAGTGGGAGGTTTTATTGGTATATGTACAATAATTTATTGTTTATGGACAGGTGTTTGTTTTGGGAAAAAGAAAGTTCACAGTTCTGTGCAACCAACAGTCACAAGAGGTAGTAGCAACAGTTCAAATTCAAGTGCATCTTCGATAAAATCGGTCATTATGCGTCAAGGTTCGAGAATAATGAGGCGGCAGAGGAGTGGACCTTCATCAACAAAGCATCAAGAAAGGGCAGAGGAGTTTAGTCTTTCTGAGCTTATGGCAGCTACCAACAATTTCTCATTCCAGAACAAAATTGGCGCTGGAAGCTTTGGTATTGTGTATTTTGGAAAATTAACCGATGGTCGCGAAGTAGCAATCAAAAGAGGTGAACCAGGTACAAAGCTTAAAAAATATCAAGAGAAAGAGAGTGCATTTGAGTCTGAGTTAGCTTTTTTGTCGCGTTTACATCATAAACACTTGGTTAGACTAGTTGGTTATTGTGAGGAGAAAGATGAGAGGCTTTTGGTGTATGATTACATGAAGAATGGTTCATTGCATAGTCATTTGCATGATAAGAATAATGTAGAAAAAGGTAGCAATTTGTTGAATTCATGGAAAATGAGGATAAAAATTGCTTTGGATGCATCAAGAGGAATAGAATATCTACATAATTATGCAGTTCCTTCAATAATTCATAGAGATATTAAGTCATCAAACATTCTTCTTGATTCGACTTGGACAGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAATCTGATATTGATTACAAACCAACAAAAACAGCAGGAACAGTTGGTTATATCGATCCCGAGTACTATGGTTTGAATTTATTAACAGCAAAGAGTGATGTTTATGGACTTGGAGTTGTATTACTGGAATTGTTAACAGGAAAAAGAGCTATATTTCGGAATGGTGAAGATGGAGGAAATCCTTTGAGTATAGTTGATTTTGCAGTGCCTGCTATTTTGGCTGGTGAATTGATGAAAATTTTGGACTCAAGAGTTGGAACACCGCCAACGGAAAGTAATGAATCGGAGGCGGTTGAGTTAATGGCGTATACTGCTGTACATTGTGTGAATTTGGAAGGGAAAGATAGACCAACTATGGCTGATATTGTGGCTAATTTGGAAAGAGCATTGCTTATTTGTGAAGGTGGTAGTAACCATGAGATTGAAAGCATTTCCAGTGTTACTATCTCTGTTTCAGATTGA 2367 0.3921 MKNLITHLIFVTAIIIFYLSPSAHTLGSGTTLSVTDSPATVCGIISGETTQHIQCYREGEVFNILPNVSFSSISGGRSYFCGLRSGNYSLHCWDSSSFQTKRLYSNDSFLLENLSVGDFQVCATVVGVGTVRCWRTFDGFEPSGLDHFGSISSGSNFSCGILKTGLQVRCWGEKTVAERLQNEFRNMSMLSIVAGGSNVCGLNSTGFLVCKGSNSSGQLDVPQGGAFEYGDIALGDEHGCAVRRLNGSVVCWGGKGEFSADSIEGVSFELIVSGSNFTCGLTTTNFSVVCWGPGWSNGSNGSESILPLSRILPGPCVQSSCSECGIYPDSQSLCSNFGHICNPNICNTQITSPPPPPPAPSPPRSSRSKTLTTGLLVFAIVGSVGGFIGICTIIYCLWTGVCFGKKKVHSSVQPTVTRGSSNSSNSSASSIKSVIMRQGSRIMRRQRSGPSSTKHQERAEEFSLSELMAATNNFSFQNKIGAGSFGIVYFGKLTDGREVAIKRGEPGTKLKKYQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYDYMKNGSLHSHLHDKNNVEKGSNLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDSTWTARVSDFGLSLMSPESDIDYKPTKTAGTVGYIDPEYYGLNLLTAKSDVYGLGVVLLELLTGKRAIFRNGEDGGNPLSIVDFAVPAILAGELMKILDSRVGTPPTESNESEAVELMAYTAVHCVNLEGKDRPTMADIVANLERALLICEGGSNHEIESISSVTISVSD* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2169 788 SUPERFAMILY RCC1/BLIP-II 231 297 IPR009091 -
Mtr3g2169 788 SUPERFAMILY RCC1/BLIP-II 23 254 IPR009091 -
Mtr3g2169 788 Gene3D Transferase(Phosphotransferase) domain 1 555 773 - -
Mtr3g2169 788 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 776 IPR044815 GO:0004674
Mtr3g2169 788 Gene3D Phosphorylase Kinase; domain 1 435 554 - -
Mtr3g2169 788 Pfam Protein kinase domain 475 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2169 788 ProSiteProfiles Protein kinase domain profile. 474 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2169 788 Gene3D - 188 325 IPR009091 -
Mtr3g2169 788 Gene3D - 24 187 IPR009091 -
Mtr3g2169 788 SUPERFAMILY Protein kinase-like (PK-like) 451 761 IPR011009 -
Mtr3g2169 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Mtr3g2169 788 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 776 - -
Mtr3g2169 788 Coils Coil 510 530 - -
Mtr3g2169 788 SMART serkin_6 474 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2169 788 ProSitePatterns Protein kinases ATP-binding region signature. 480 502 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2169 Mtr-Chr3 35247874 35250705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2169 1 778 Receptor kinase-like Gene Family AT3G55950 57.811 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr3g2169 Pkinase 4.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2169 - - gmx:100786639 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2169 3 35247874 35250705 Mtr5g2822 5 36756105 36758838 ECH
Mtr3g2169 3 35247874 35250705 Mtr3g2169 3 35247874 35250705 ECH