Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2159 ATGGCTGAAATACTTGGGTCATTCCTCTCTTCCTTGTTAGCATCAAAGGTGGATAGGATATCCGTTCAAGACTTTAAAGATTTCTTTAAGGGCAACGGTATTGATGAGAGGCATCTCCAAGACTTAAGACTGCTTTTATTATCCGTCGCTACTGTGCTCAATGATGCGGAGGAGAAGCAATTTATTGAACCATGGGTGAAAGAGTGGACTGATAAAGTTAAGGATGTTGCATATGATGCCGATGACTTAATGGATGAGCTAGTCACCAAGGAAATGTATTCAAGGGATTTTGCTTCGTCTCTCAATCCATTTGCTGAACGACCACAATCTAGAGTTCTAGAGATTCTTGAGAGGTTAAGATCCTTAGTAGAGCTCAAAGACATTCTCATTATTAAGGAAGGTAGTGCAAGTAAATTACCCTCATTTACTTCAGAAACAACTTCTTTGGTAGATGAACGTCGAGTGTACGGTAGAAATGTTGATAAGGAGAAAATTATCGAGTTTTTGTTATCCAACAACTCCCAAGATGTGGAAGTGCCTGTAGTTGCTATTGTTGGGATGGCAGGAGTTGGCAAGACCACTCTTGCTCAGATATTATACAATGATTCACGAGTTATGGACCATTTTCAGTCAAGATCGTGGGCATCCGTTTCAGGAAATTCGAAAATGCAGGAAATAACTAAACAAGTTCTTGATTCATTCACTTTGTGTCAATCTGATGTCGTGGACTTCAATGGTCTCCAAATTCGGCTAAAAAAAGAATTAACAGGGAAAAGGTTTTTACTTGTTTTGGATGGGTTCGAGAATGAGAATTATCTTGATTGGGATATCCTTCAAATGCCTTTTGTTTCAGAAAATAATGGAAGTAGAATAATTGTTACCACACGTAATAAAAGGGTTGCCACAGCAATCCGTGCTAATCTAACTCATTTCCCCCCGTTCCTATCTCAAGAGGCTTCATGGGAGTTATTCTCAAGTCATGCATTCAAGTCTCAAAACTCAAATGAACGAAGTCGTGTTTTGACAGAAATTGGTAAAAAAATCGTTCAAAGGTGTGGTGGTCTCCCCCTAGCCACAATTACACTAGGGAGTCTCTTAAATTCAAAAGAGGACAGTGAGGAGTGGGAAAATGTTTGTACCAGTAAATTATGGGATTTATCAAGAGGGGGGAACAACATATTTTCTGCATTAATTTCAAGCTACATACGCCTGCCTCCATATCTCAAGCGGTGCTTTTCATTTTGTGCCATCTTTCCGAAAGGCCATAAAATAGAAAAAGGGAACTTGATATATTTATGGATGGCTGAAGGTCTTTTGCCACGATCAACAATGGGAAAGAGAGCAGAAGATATAGGAGAAGAATGTTTTGAGGAGTTGGTGACGAAGACGTTCTTTCACCACACATCGAATGATTTTTTAATGCATAACATTATGCATGAGTTAGCAGAATGTGTTGCAGGTAAATTTTGTTACAAGTTGACGGATAGTGATCCAAGCACAATTGGAGTGAGTAGAGTGCGCCGTATCTCATATTTTCAAGGAATATACGATGACCCTGAACATTTTGCTATGTACGCTGGTTTCGAGAAGTTGAGGACCTTCATGCCTTTTAAATTCTACCCCGTTGTTCCTTCGTTGGGTGAAATTTCCACTTCAGTTTCAATTCTATTAAAAAAACCAAAGCCTCTGCGTGTCTTCTCTTTGTCTGAATATCCGATTACCTTATTGCCTAGTTCAATTGGTCATTTATTGCATTTGCGGTATTTGGATCTTTCTTGGACTCCAATTACTTCTCTACCTGATTCTATCTGCAATCTGTATAACTTAGAAGCATTATTGCTGGTGGGTTGTGCTGATCTTACTTTGTTACCAACAAAAACATCCAAGCTTATCAACCTACGACAATTGGATATTAGTGGCAGTGGTATAAAAAAGATGCCTACAAATCTTGGCAAGTTAAAGTCTCTTCAATCGTTGCCTCGTTTTGTCGTTAACAATGATGGGGGATCAAATGTTGGTGAATTGGGGGAGATGTTGGAACTTCGTGGCTCACTTTCCATTGTGAACTTGGAAAATGTTCTGCTTAAAGAAGAAGCATCCAATGCTGGGTTGAAGCGTAAAAAATATCTTCATGAGGTCGAATTCAAGTGGACAACTCCAACACACAGTCAAGAGAGCGAAAATATTATATTTGACATGCTAGAGCCGCATCGAAACTTGAAAAGACTTAAAATAAATAATTTTGGTGGTGAGAAGTTTCCAAATTGGCTAGGGAGCAATTCAAGTTCTACTATGATGTCTCTATAA 2307 0.3897 MAEILGSFLSSLLASKVDRISVQDFKDFFKGNGIDERHLQDLRLLLLSVATVLNDAEEKQFIEPWVKEWTDKVKDVAYDADDLMDELVTKEMYSRDFASSLNPFAERPQSRVLEILERLRSLVELKDILIIKEGSASKLPSFTSETTSLVDERRVYGRNVDKEKIIEFLLSNNSQDVEVPVVAIVGMAGVGKTTLAQILYNDSRVMDHFQSRSWASVSGNSKMQEITKQVLDSFTLCQSDVVDFNGLQIRLKKELTGKRFLLVLDGFENENYLDWDILQMPFVSENNGSRIIVTTRNKRVATAIRANLTHFPPFLSQEASWELFSSHAFKSQNSNERSRVLTEIGKKIVQRCGGLPLATITLGSLLNSKEDSEEWENVCTSKLWDLSRGGNNIFSALISSYIRLPPYLKRCFSFCAIFPKGHKIEKGNLIYLWMAEGLLPRSTMGKRAEDIGEECFEELVTKTFFHHTSNDFLMHNIMHELAECVAGKFCYKLTDSDPSTIGVSRVRRISYFQGIYDDPEHFAMYAGFEKLRTFMPFKFYPVVPSLGEISTSVSILLKKPKPLRVFSLSEYPITLLPSSIGHLLHLRYLDLSWTPITSLPDSICNLYNLEALLLVGCADLTLLPTKTSKLINLRQLDISGSGIKKMPTNLGKLKSLQSLPRFVVNNDGGSNVGELGEMLELRGSLSIVNLENVLLKEEASNAGLKRKKYLHEVEFKWTTPTHSQESENIIFDMLEPHRNLKRLKINNFGGEKFPNWLGSNSSSTMMSL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2159 768 Pfam Rx N-terminal domain 36 95 IPR041118 -
Mtr3g2159 768 PANTHER DISEASE RESISTANCE PROTEIN RP 30 767 IPR044974 GO:0006952
Mtr3g2159 768 Gene3D - 141 310 IPR027417 -
Mtr3g2159 768 SMART LRR_typ_2 630 653 IPR003591 -
Mtr3g2159 768 SMART LRR_typ_2 583 606 IPR003591 -
Mtr3g2159 768 PRINTS Disease resistance protein signature 181 196 - -
Mtr3g2159 768 PRINTS Disease resistance protein signature 254 268 - -
Mtr3g2159 768 PRINTS Disease resistance protein signature 352 366 - -
Mtr3g2159 768 PRINTS Disease resistance protein signature 628 644 - -
Mtr3g2159 768 Gene3D - 11 124 - -
Mtr3g2159 768 Pfam NB-ARC domain 161 380 IPR002182 GO:0043531
Mtr3g2159 768 ProSiteProfiles Leucine-rich repeat profile. 585 606 IPR001611 GO:0005515
Mtr3g2159 768 PANTHER OS05G0414200 PROTEIN 30 767 - -
Mtr3g2159 768 Gene3D - 314 399 IPR042197 -
Mtr3g2159 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 415 IPR027417 -
Mtr3g2159 768 Coils Coil 687 707 - -
Mtr3g2159 768 Gene3D Ribonuclease Inhibitor 545 768 IPR032675 -
Mtr3g2159 768 Gene3D - 400 484 IPR036388 -
Mtr3g2159 768 SUPERFAMILY L domain-like 474 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2159 Mtr-Chr3 35157312 35165625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2159 155 696 WRKY Transcription Factor Family AT5G45050 22.403 5.29e-14 74.3