Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2157 ATGGCACTTAATGCGAAACCGAGTGTTGGTTTGGAGTTTGATAGCGTAGATACGACTTGGCAATTTTGGGTTGAATATGGTAAGAAATGTGGTTTGGGAGTTAGAAATGATTACTTGAACAAACGAAAGGTAGATGGCTTGATTACATCCGGCATATTTGTTTGTTCCAAGGAGGGCAGTAGGTTGAAAGACAAAAGATCCTCTTTGGTTAAAAAGCCTAGGGCTGATACAAGATCAAGGTGTCCAGCAGGAGGTAGAGCTAATCTCGGATTTACACGATTGGATGTCAAAAACAATCTTAAAGCAAGAAGACAACGTAGCATGGTGTATGGAAAAGTTGGTAGTCTTATGCAGTATTTTCAACACCAGATGTTGGACAATCCATCATTTTACCACGCATATCAAATGGATTGTGATGAACAAATCACAAACATATTTTGGGCTGATGCAAGAATGATATTGGATTATGGATATTTCGGTGATGTAGTTTCTTTGGATACAACATATTGCACCAACCGTGCTAATCGACCACTTGCATTATTTTCAGGCTTTAACCATTATAGAGGCACAATCCTTTTTGGGGCTGCACTACTATATGATGAAACCGCTGACTCATTCAAATGGTTATTTGAAACATTTCTTGAAGCGCATGGAAATAAAAAGCCTCAAACCTTGTTCACTGACCAAGCCCAAGCAATGGCTAAAGCACTAGGTGAGGTGATACCAGAGACTCGACATGGGTTATGTACATGGCATTTGATGCAAAATGGGATCAAACACCTAGGTAGCTTGATGAAAGGGGGAAGTGATTTCCTAACTGACTTTAAGAAGTGCATGTATGAATACGATTCAGAGGTGAAGTTTGAAGCAGCTTGGAGCAAGTTGGTTGCAAAATTTGATCTATTTGGTAACAATTGGGTGAAATCAATGTGTGGTATCAAGCAAAAATGGGCATCATGTCACATGAACAAAGTTATCACTCTTGGAATGCGAAGCACTCAACTTAGTGAGAGTTTAAATTCCAGTTTTAAGGCTTGTATGAGCCCTGGTATCAGTGTCATTCAATTCTTCCAACACTTTGAGAAAGTTGTTGAGGAGAAACGATACAACGAGTTAGTATGTGAGTATGAGTCTCGACATAAACTACCAAGGATGAGATATCAACATTCACCAATTCTAATGCAACTCGCACAAGTGTACACACATAAAATCTTTGATACGTTCAATGATGAGTTTTCCTTATTCTTAGCTGCTAGCAAAAAAACAGAGAATCTGTCTCAACTTCCATTTGAATATGTTATCACCATGTTTAAAGTGGAAGGAGAGTGGACAGTACTATTTGATCCAATAACTTTCTCTATATCATGTACTTGTAAAAAATTTGAGACTTTTGGCATACTCTGTTGTCATGCATTAAAAGTCATTGAGGCAAATGATGTTAAACTGATCCCCAATCAATACATCTTAAAAAGATGGACAAGAGATGCTCGTGATGGTGTTATTTTTGATATTAGAGGAAATGAGGTTGTTGATGATCCTAAACTGTTTAGAACACATCGATATAAGAGATTATGCGCCACTATAATTAGATTGGCAGCCGACGTGTCAACATCTGAATATCTACATAAGCTTGTAGAAAAGGGTTTGTATGACTTGTGTAAGCTGGTGATGGAGGCTCGATTACGAGAAATAGAGAATGCCAATGATGAAGGTGATGTCCCAACAACGCCTAAAGAGTTGTGTCGAGCTTATATCTAA 1758 0.3828 MALNAKPSVGLEFDSVDTTWQFWVEYGKKCGLGVRNDYLNKRKVDGLITSGIFVCSKEGSRLKDKRSSLVKKPRADTRSRCPAGGRANLGFTRLDVKNNLKARRQRSMVYGKVGSLMQYFQHQMLDNPSFYHAYQMDCDEQITNIFWADARMILDYGYFGDVVSLDTTYCTNRANRPLALFSGFNHYRGTILFGAALLYDETADSFKWLFETFLEAHGNKKPQTLFTDQAQAMAKALGEVIPETRHGLCTWHLMQNGIKHLGSLMKGGSDFLTDFKKCMYEYDSEVKFEAAWSKLVAKFDLFGNNWVKSMCGIKQKWASCHMNKVITLGMRSTQLSESLNSSFKACMSPGISVIQFFQHFEKVVEEKRYNELVCEYESRHKLPRMRYQHSPILMQLAQVYTHKIFDTFNDEFSLFLAASKKTENLSQLPFEYVITMFKVEGEWTVLFDPITFSISCTCKKFETFGILCCHALKVIEANDVKLIPNQYILKRWTRDARDGVIFDIRGNEVVDDPKLFRTHRYKRLCATIIRLAADVSTSEYLHKLVEKGLYDLCKLVMEARLREIENANDEGDVPTTPKELCRAYI* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2157 585 Pfam FAR1 DNA-binding domain 21 83 IPR004330 -
Mtr3g2157 585 ProSiteProfiles Zinc finger SWIM-type profile. 443 479 IPR007527 GO:0008270
Mtr3g2157 585 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 100 554 IPR031052 GO:0006355
Mtr3g2157 585 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 83 IPR031052 GO:0006355
Mtr3g2157 585 SMART 26again6 454 481 IPR006564 GO:0008270
Mtr3g2157 585 Pfam MULE transposase domain 162 256 IPR018289 -
Mtr3g2157 585 Pfam SWIM zinc finger 452 477 IPR007527 GO:0008270
Mtr3g2157 585 PANTHER OS03G0181600 PROTEIN 100 554 - -
Mtr3g2157 585 PANTHER OS03G0181600 PROTEIN 5 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2157 Mtr-Chr3 35132849 35134875 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g2157 MULE 1.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2157 - - cam:101507984 606.675