Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2155 ATGGCTTTCAGAACAAGTGGAACACTGATTTTAGCGACTCTCATTTGGATTTTCTTCCTCTGTGCAACCATTGCTTTCTTTCAGCTCAAATTGGTTGAAAACGGAACCCATCAAGCTTCTTCTCATGACAAAATTCAAAACCATCATCACTCAGATACCCTTTTGGAAGATGATTTGGAGGGTGTGACCAACAAGGTGTATTTTGATGTAGAGATTGATGGAAAATCAGTGGGTCGCATAGTCATGGGCCTTTTTGGGACCACAGTACCGAAAACTGCAGAAAACTTCCGTGCGCTTTGTACAGGAGAGAAAGGGGTAGGAAAAAGTGGGAATCCTCTTCATTATAAAGGGAGCGCATTCCATAGGATAATACCAAGCTTCATGGTTCAGGGTGGTGATTTCACCAGTGGTGATGGAAGAGGTGGAGAATCAATCTATGGTGATAAGTTTGCCGATGAAAACTTCAAGCTGAAGCATACTGGTCCAGGATACTTATCAATGGCAAATTCTGGGCAAGATACCAATGGCTCACAGTTTTTCATAACAACAGTAAAAACTAGCTGGCTGGATGGACGCCATGTTGTATTCGGCAAGGTACTTTCTGGTATGGATGTTTTGCACAAGATTGAAGCAGAAGGAAGTGAAAGTGGCTCTCCCAAACGTACGGTTGTCATATTAGACAGTGGGGAATTAACTTCATGA 702 0.4259 MAFRTSGTLILATLIWIFFLCATIAFFQLKLVENGTHQASSHDKIQNHHHSDTLLEDDLEGVTNKVYFDVEIDGKSVGRIVMGLFGTTVPKTAENFRALCTGEKGVGKSGNPLHYKGSAFHRIIPSFMVQGGDFTSGDGRGGESIYGDKFADENFKLKHTGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVLHKIEAEGSESGSPKRTVVILDSGELTS* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2155 233 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 115 132 IPR020892 GO:0003755|GO:0006457
Mtr3g2155 233 SUPERFAMILY Cyclophilin-like 62 231 IPR029000 -
Mtr3g2155 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 68 227 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 Gene3D - 54 233 IPR029000 -
Mtr3g2155 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 163 178 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 190 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 38 231 - -
Mtr3g2155 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 67 230 IPR002130 GO:0000413|GO:0003755
Mtr3g2155 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 38 231 - -
Mtr3g2155 233 CDD cyclophilin_ABH_like 65 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2155 Mtr-Chr3 35125026 35128624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2155 78 228 U-box Gene Family AT5G67530 43.791 9.42e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2155 K01802 - gmx:100792649 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2155 3 35125026 35128624 Mtr3g2155 3 35125026 35128624 ECH