Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2152 ATGGCAAATTACTATGATATGGATGACATTTTGGTGGAGGAAGAGATTGTGTCGGTTATATTTCAGAAGGCAGCATCTGGAGTGGGAATAATAGATCCCAGTTCCGAGACAGACTTTATTGAAGCGGGTTCAAAAGTTGAACTACCTTTTTGGCTTGCTCATGAGTTACAGTTGAGACAAGCAGTATCAGTCAATGTTCCTCCTTGTTTCAATCAAAAAACAAGACTAGAGATCCAAGCTGATTGTGCATGTGTGGATCTGAGGTCGAGATGTCCATACTTTTATGAATTTGGTTGCAAGATAGCACCAATAGTTGGCGATAGGACCATTGGGTTTCTGTTGTTGTCTGCATTTAAGAATCGGTATAAGGAGGTCCTTACGAAGGCACACACTGCAGCAATTGCAGCTGGTTCCAAATTTTGGACTATTCTAACAAACGAGGAGATCAATTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGTATGGGGGGCCCCAGATTTCAGATAGCTTCTATTCTTGGAAGGAAGAGAAAACCAACTGAATAG 561 0.4207 MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQAVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKNRYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKPTE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2152 186 CDD GINS_A_psf3 62 168 - -
Mtr3g2152 186 Pfam GINS complex protein 46 148 IPR021151 -
Mtr3g2152 186 Gene3D - 2 167 IPR038437 -
Mtr3g2152 186 SUPERFAMILY GINS helical bundle-like 66 167 IPR036224 -
Mtr3g2152 186 PANTHER UNCHARACTERIZED 1 185 IPR010492 -
Mtr3g2152 186 SUPERFAMILY PriA/YqbF domain 1 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2152 1 183 Core DNA Replication Machinery Family AT3G55490 70.492 3.89e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2152 K10734 - gmx:100799874 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2152 3 35112734 35118277 Mtr3g2152 3 35112734 35118277 ECH