Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2147 ATGGCTTATTTCCTCTTCTTCATCATCTTCATCTTCTTCCTCTTCCTCCTCCTCCTCAGAAAACTCCGTTACGCGAGACTCCAGCTACCACCGGGGAGTCTCGGTTTACCGTTCATCGGAGAAACTTTACAAATGATATCAGCATACAAGAGTGACAATCCAGAGCCATTCATCGACCAGCGAGTGAACCGGTACGGTTCAATCTTTACTAGTCATGTTTTTGGTGAACCGACAGTTTTCTCTGCTGACCCGGAAACAAACCGATTTATTATTATGAATGAAGGGAAGCTTTTTGAATGTAGCTACCCCGGTTCAATATCAAACCTTCTTGGAAAACATTCATTGCTTCTTATGAAGGGTTCTCTTCACAAGAAAATGCATTCTCTCACTATGAGTTTTGCTAATTCGTCTATTATTAAGGATCATCTTCTCTTTGATATAGACCGGCTCATCCGGCTCAACTTGGATTCTTGGTCCGACCGGGTTCTTCTCATGGAGGAGGCTAAGAAGATAACATTTGAGTTGACAGTTAAACAGCTGATGAGTTTTGATCCAGATGAATGGACTGAGAGTTTAAGGAAAGAGTACATGCTTGTAATTGAAGGGTTTTTCACTCTCCCATTTCCTCTTTTCTCTACCACCTACCGTAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTGACACTAGTAGTGAGGCAGAGGAGAAAAGAGAATGAAATAGGCATAGAGAAAAAGAATGACATGCTTGGAGCATTGTTGGCATCTGGTGAACAGTTCTCAAACGAGGAAATAGTTGATTTTATGTTGGCTTTGCTCGTTGCTGGTTATGAAACTACTTCTACAATTATGACTCTTGCCATCAAATTTCTCACTGAAACTCCTTTAGCCTTGGCACAACTCAAGGAAGAGCATGAGCAGATAAGAGCAAGGAGTGAGCCAGAGGCAGCACTGGAATGGACAGATTACAAGTCAATGACATTTACTCAATGTGTTGTGAATGAGACCTTAAGGGTTGCAAACATAATTGGTGCCATATTTAGGAGAACAACCACAGACATCGACATAAAAGGTTACACAATTCCTAAGGGAATGAAGGTGATTGCATCATTTCGTGCTGTGCATTTGAATCCTGAACATTTCAAAGATGCTCGCACCTTCAATCCATGGAGATGGCAGAATAATAACTCAGAAGCTGTAGCAAGCCCTGGGAGCATATTTACACCATTTGGAGGAGGGCCAAGGTTGTGCCCAGGCTATGAGCTTGCCAGAGTTGTTCTTTCCGTCTTCCTTCACCGCATGGTTACTCGCATCAGTTGGGTTCCTGCTGAAGAAGATAAGTTGGTGTTTTTTCCAACCACTAGGACGCAGAAGAGGTATCCTATTTTAGTGAAGCGCAGAGAAGAATCTACAAGATCATGCATTGGATTTGGATACACAACAGACACGGGAAGGAAAAAAGAGAGCTGA 1473 0.4284 MAYFLFFIIFIFFLFLLLLRKLRYARLQLPPGSLGLPFIGETLQMISAYKSDNPEPFIDQRVNRYGSIFTSHVFGEPTVFSADPETNRFIIMNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSSIIKDHLLFDIDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYMLVIEGFFTLPFPLFSTTYRRAIKARTKVAEALTLVVRQRRKENEIGIEKKNDMLGALLASGEQFSNEEIVDFMLALLVAGYETTSTIMTLAIKFLTETPLALAQLKEEHEQIRARSEPEAALEWTDYKSMTFTQCVVNETLRVANIIGAIFRRTTTDIDIKGYTIPKGMKVIASFRAVHLNPEHFKDARTFNPWRWQNNNSEAVASPGSIFTPFGGGPRLCPGYELARVVLSVFLHRMVTRISWVPAEEDKLVFFPTTRTQKRYPILVKRREESTRSCIGFGYTTDTGRKKES* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2147 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Mtr3g2147 490 Pfam Cytochrome P450 206 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 Gene3D Cytochrome P450 20 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PANTHER CYTOCHROME P450 90A1 7 466 - -
Mtr3g2147 490 SUPERFAMILY Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PANTHER CYTOCHROME P450 26 7 466 - -
Mtr3g2147 490 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr3g2147 490 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2147 Mtr-Chr3 35044534 35051296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2147 118 472 Cytochrome P450 AT5G05690 79.155 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2147 K09588 - gmx:100775886 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2147 3 35044534 35051296 Mtr3g2147 3 35044534 35051296 ECH
Mtr3g2147 3 35044534 35051296 Mtr5g2814 5 36670449 36678225 PCT